Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83540 |
Symbol | ASN1 |
ID | 4838720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1196823 |
End bp | 1198692 |
Gene Length | 1870 bp |
Protein Length | 573 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390035 |
Product | asparagine synthetase |
Protein accession | XP_001384527 |
Protein GI | 126136006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.163199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAGAGTTCGA GGTATTTTGC CGGTTGTTTC ATATTCCATC CCTTTTCTAC CACCCTCTTC CTTGTCTGTC TAAATTAGCA TATTTCCAAC ATGTGTGGTA TATTTGCAGC CTATAAGCAA CCTGAGGTTG AACTTTTCAA GTCGAAAGCT TTACAGTACT CCAAAAGAAT CCGTCACCGT GGTCCCGACT GGTCAGGTAA CGTGATCCAG AACTCTACCA TCTTGTGCCA CGAGAGATTG GCCATTGTCG GTTTGGACTC CGGTGCTCAA CCAATCACCT CAGAAGATGG CAACTACACC TTGGCCGTTA ACGGAGAAAT CTACAACCAT ATCCAGTTGA GAGACGAGTT TAACACCTAC AAGTATAAAT CGTTGTCAGA CTGTGAGCCC ATCATTCCAC TTTACGAAAA GTACGACGTC GATGCCCCCA AATACTTAGA CGGGATGTTT GCCTGGGTTC TCTACGACAA GAAAGCTGAC CGTATCGTAG CTGCCAGAGA CCCCATCGGT ATCACTACTT TGTATCTCGG AAAGAGTTCG AAGAACCCCG AAACAAGATA CTTTGCCTCA GAGTTGAAGT GTTTGATCGA CGAATGTGAC GAGGTAACGG CTTTCCCACC TGGTCACGTC TACGACTCCA ACACTGATCA GATCACGAGA TACTTCACTC CAACATGGTG GGACGGTTCT AAGATTCCTT CGAAGCATGC TGACTTGAAG GAAGTGAGAG AAACCTTGGA ATTAGCCGTG AGAAAGAGAT TAATGGCCGA AGTGCCCTAC GGTGTGCTTC TTTCAGGTGG CTTGGACTCG TCGTTGATTG CTTCGATCGC TGCCAGAGAA ACAAAGAAGG CTGCTGCTTC CGTTTCGGAT GAAGGTATAG ATGCCAACAA GGAGTTGTCT GGTGTTGATG AAAAGGGTTC GTTGCACTTT TCTGGCTTCA CCAACTCCTT GCATTCGTTT GCTATTGGTT TGCCAGGTGC CCCAGACTTG ATCGCTGCTG AAAAGGTAGC CCACTTCATT GGAACTATTC ACCATTCTCA CACTTTTACA GTGGAAGAAG GTTTGGATGC ACTTGACGAT GTCATCTACC ACTTAGAAAC CTACGATGTC ACCACCATCA GAGCATCCAC GCCAATGTAC TTACTTTCTA GAAAGATTAA GGCCCAGGGT GTCAAGATGG TGTTGTCTGG TGAGGGATCG GACGAAGTAT TTGGAGGCTA CTTGTACTTT GCCAACGCCC CAAGTGCTAA GGACTTCCAC CAGGAATGTG TCCAGAGAGT CAAGGACTTG CACTACGCCG ACTGTTTGAG AGCCAACAAG TCCACCATGG CCTGGGGATT GGAAGCCAGA GTTCCTTTCT TGGACAAACA GTTCTTGGAA GTGTGTATGA ACATCAACCC AGAAGACAAG TTGATAAAAC CAGCTGAAGG CAAAATTGAA AAATACGTCT TGAGAAAGGC TTTCGACACC TCGGATGAAC CAGACGTCCA CCCATACTTG CCCAAGGAAA TCTTGTGGAG ACAAAAGGAA CAGTTCTCCG ATGGTGTTGG TTACTCCTGG ATTGATGGCT TAAAGGACGC TGCTGAGGCT GCTGTCTCTG ACGAAGAATT TGCCAACCCT AAGCCTGAAT GGGGATCAGA TATTCCAACT ACTAAGGAGG CCTACTGGTA TAGATGCAAG TTTGACCGTG TGTTCAACAA CTCGGCAACT GCTGCCTCCA CTGTCATGAG ATGGATTCCA AAGGCTGAAT GGGGCTGTCA TGAAGATCCT TCCGGAAGAT ACGCTGCCAC TCACGACCAC AAGGTCATCT GAGAGATCTA TCTTTATAGA TTGTACATAT CACGAACCGT AAAATAAAAC AAACATTGAG
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Protein sequence | MCGIFAAYKQ PEVELFKSKA LQYSKRIRHR GPDWSGNVIQ NSTILCHERL AIVGLDSGAQ PITSEDGNYT LAVNGEIYNH IQLRDEFNTY KYKSLSDCEP IIPLYEKYDV DAPKYLDGMF AWVLYDKKAD RIVAARDPIG ITTLYLGKSS KNPETRYFAS ELKCLIDECD EVTAFPPGHV YDSNTDQITR YFTPTWWDGS KIPSKHADLK EVRETLELAV RKRLMAEVPY GVLLSGGLDS SLIASIAARE TKKAAASVSD EGIDANKELS GVDEKGSLHF SGFTNSLHSF AIGLPGAPDL IAAEKVAHFI GTIHHSHTFT VEEGLDALDD VIYHLETYDV TTIRASTPMY LLSRKIKAQG VKMVLSGEGS DEVFGGYLYF ANAPSAKDFH QECVQRVKDL HYADCLRANK STMAWGLEAR VPFLDKQFLE VCMNINPEDK LIKPAEGKIE KYVLRKAFDT SDEPDVHPYL PKEILWRQKE QFSDGVGYSW IDGLKDAAEA AVSDEEFANP KPEWGSDIPT TKEAYWYRCK FDRVFNNSAT AASTVMRWIP KAEWGCHEDP SGRYAATHDH KVI
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