| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83480 |
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| Symbol | CNH1 |
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| ID | 4838998 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 130924 |
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| End bp | 134360 |
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| Gene Length | 3437 bp |
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| Protein Length | 834 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390313 |
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| Product | Na+/H+ antiporter |
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| Protein accession | XP_001384325 |
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| Protein GI | 126135602 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00844] na(+)/h(+) antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.932165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCACGTTTA AAAACATCTG ACAACGCCAG AGGCGATCTA GAATCACACA CAGTACCATG
GTCTGGAGTC AGCTAGAGGT AAGTACTTTC TTTTTAGGCT AAGCTTTTTT GAAGAGTGAT
AGTGTCAAGA AAACAGACAG ACTGGGCGGT TGTGTTCCAA ATAGAAGATG AAGAGTAAAG
TTTTGTATTG GCATGCGAAG AAGCCAGAAC AGACGACTGG ATCAAGTGAG GCTTGGAACG
GATTAATCGG ATAGATGGGT CATCGCAAAG AATACAGCGA AGAATGAATA GCTTTTCAAT
TTGAAGACAA TTGCTTTGAC AGACAAGAAA AGTGAAAGGT CCAAGAAAAC TGAAATGTGT
CAGGCCTACC GTGCATATCA AGAACAGAAA CTGAAAGGAT CGTTTATCCC AAGATACTGT
GAAGCTGTAC CATACGTACT CCCAGAGGGT GTATTATTAT TTATCGATGA CACGTCCAGA
AAAGGTTAGC GAGTCTTCTT ACGAACCAGC TCTCTATTCT TATTCCATCA TCGTCTTGGT
CCTTATCTTC ATCCAGGATT CATTTTCTTG AATATTATAC TTTCTTCATT TCGTACATTT
TTTCAACTTT ATACTAACCT ACTCAGCTAG AGGATGTGCA CATCGCCTAT GCGTGTGTGG
GGATATTCTC CACCCTCTTT TCGCTTGTAT CGTTGTTTGT CAAGGAGAGA CTTTATATTG
GTGAAGCCAC TGTAGCGACT ATAGCAGGAT TAATTCTTGG TCCGCATTGT CTTGGCTGGT
TTGACCCAGT CACTTGGGGA AACACAGATC ACATCACCTT GGAGATAAGT CGAATAGTCT
TATGTATCCA AATCGTAGCC GTGGCCGTAG AATTGCCTAG GAAGTACATG AAGAAGCACT
GGTTGTCGGT GGCTATCTTT TTGTTGCCTG TAATGACATG TGGCTGGCTA GTGGTAGGGC
TCTTTGTATG GGTTCTCATT CCACACTTTA ACTTCTCAGA TGCTCTTTTG GTGGCTGCTT
GTGTCACTGC TACTGACCCT GTGTTGGCAG CTGCTGTTGT TGGTAAGGGT AAGTTTGCAG
AAAGAGTACC GGGTCATTTG AGAAACTTGT TATCGGCTGA ATCCGGCTGT AACGATGGGA
TGGCTTTCCC CTTCATCTTT CTTTCGTTGA ACATCGTAAT CCACGGCAGC AATGTGGGAG
TAGTGCTCAA GGACTGGATC TTGCTCACGA TCTTGTGGGA ATGTATCTTC GGCTGTATCC
TCGGTGCAGT GCTAGGCTAT GTACTTAGAA AACTTGTAGC ATTCGCTGAG CAGAAAAACT
TGATCGATCG TGAATCGTTT CTTGCGATCT TTGTGTTTTT GGCATTTAAC TCCGCTGGTA
TTGGGTCCAT GTTGGGGGTC GATGACTTGT TGGTTTCGTT TGCTGCTGGT ACAGCCTTTG
GCTGGAACGG TGACTTCGCC AAAAAGACAG AGGAATCGCA TGTTTCTACG GTAATCGACT
TGTTGTTGAA CTTGGCCTTT TTTGTCTACT TCGGTGCCAT TGTACCATGG CCCCAGTTCA
ACGATGGAAG TCTTGGTTTG AACGCTTGGA GATTGGTGGT TCTTGCTGTA GTGGTCATTT
TCTTGAGAAG ATTGCCAGCC GTAATAGCTT TGAAACCGTT CACTCCTGAT GTCAAGACGT
GGAGAGAAGC ATTGTTCTGT GGCCATTTTG GACCAATCGG AGTCGGTGCT TTATTTGCAG
CCATCTTGGC TCGTAAAGAC TTGGAAGCCC ATTACACGCA CGAAGAGACT CCTTTGGCCC
ATTTGCCAGA TAAATCGCAC CCTCATTACC AACTACTTGC TACCATCTGG CCCTTGATTT
GCTTTATAGT TATCACGTCT ATCGTGGTCC ATGGATCGTC TGTAGCTGTT TTAACGTTGG
GTAAGCGTCT TAACAGAATG GCCATTACCA TGTCATTCAC CATAACTGAT AACCAAGACC
AGGGTCCTGC TTGGATGTCA AGATTGCAGA AATTGGATAA AGTGTCTACT TCCTTCTCTT
TGCACAGAGT GGACACGCTT GCTCCTAGTG TGGATACCAA TGCTCAGCCA AGTACTGCTG
TTGAAACCAG TGGAATAAAG GTCAGGCCCG CTGGAGGTGC TAAGAGAAGA AAGAACAAGA
AGAGTAAGAA GAAGAAGGGT CCTAGTTCAA GAATCAAGAA GACATTGTCT AGAGTAGCTA
CCAATGATCG TGAAGGTGAT TTGTTGTCAA GTCCAACTTT GGAAAGGCAA AGACCACAAA
CAGAAGTGTT GCAGCTAGGA AGAACTCCAT CAAGAGTTCC TCAATCTACT CAAGATACCC
CAACAAAAGA GAGTTATGAC GAAAGTTCTT CGCAATCTTG GGGACAATAT CAAGATGAGA
AATTGCCCTT TAATCCAAAC GAAAAGCAAT CCGGTAAGTC TCAGTACGGT GAGAGATTAC
CAACGGAAGA AGAAAAGACT CTCTCTGTTC CTACCACAGC TTATGCTGAA GGAAACCAAC
TTATCATTGA AGACCAACGT GGTGAAATTG TGGAGTCCTT GAGTTTGAAT AAAGTCAAGA
GCAATGCTAG CTCTCGTCTT GATGATAACT TGAGTATCCA CTCCATGGAT TCACTTCGTC
GTCATTTGTC TCAGTACGAT TCGGCAGATG TTTCTTCTGA CGGAGATCAA TCAGAAGAGT
CACCGATCAG CAAGAAGTTG TCGAGAACAA TTTCAGGCTA CAAGAAACGC ACATACTACA
GAAAGAACGA TCCTAATCAC AGAAAGGTAT ATGCTCATCA AATCGACGAC GTCATTGTCA
TAGAAAACGA GGATGGTGAA ATAATAAGAA GATACAAGGT CAACCGCCAT CCTCATTCCA
TCAGCCCTAC TCAATCTAGA AAGAGAACCG GATCTGTAGT TGCTGCTAGT CTCCAGTTCT
TCGGGCTTAA AGGCAAGGAA CCCGAAAACT TACCTGCTGT ACCTGTCATT AAAATCGACG
ATGGAAAGGC CTCTGAAAAC AAATTGATTG TCCAAAAGGA CGAACCAGGT ATAGACTCTG
CCTTGAGCGG TGCCAGAGCG CAAGTCAAAC TAGAGAGTAA ATTGGCAGAT ATGTTGGCTA
AGTCCAAAGG TACAGACCAA AAATCAAAAG TCCCAACCAT AGAATCAAAA TCAAAATTGC
CAAGTAAAAA AGAATCTCGT AAAAGGCCAA CGTCACCTGG TCCGCTCGAT ATACTGGAAG
ATTCTGAGGA GGAGGATGAC GATGACGAAG TATCTGTGCA ATCAGATGAA GTTTCAGAAG
TATCTGAAGC CTCGGAGGAT TCCGAAGAAG AGGATTCAGA CGACCTTCAG GAAACAGCTG
TGGAAAAGAG AAGAAGATTG GAAGCATTGG GCAAATTGCC TACCACCCAT AGGGATCACG
ATGATGAAGA AGAGTGA
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| Protein sequence | MVWSQLELED VHIAYACVGI FSTLFSLVSL FVKERLYIGE ATVATIAGLI LGPHCLGWFD
PVTWGNTDHI TLEISRIVLC IQIVAVAVEL PRKYMKKHWL SVAIFLLPVM TCGWLVVGLF
VWVLIPHFNF SDALLVAACV TATDPVLAAA VVGKGKFAER VPGHLRNLLS AESGCNDGMA
FPFIFLSLNI VIHGSNVGVV LKDWILLTIL WECIFGCILG AVLGYVLRKL VAFAEQKNLI
DRESFLAIFV FLAFNSAGIG SMLGVDDLLV SFAAGTAFGW NGDFAKKTEE SHVSTVIDLL
LNLAFFVYFG AIVPWPQFND GSLGLNAWRL VVLAVVVIFL RRLPAVIALK PFTPDVKTWR
EALFCGHFGP IGVGALFAAI LARKDLEAHY THEETPLAHL PDKSHPHYQL LATIWPLICF
IVITSIVVHG SSVAVLTLGK RLNRMAITMS FTITDNQDQG PAWMSRLQKL DKVSTSFSLH
RVDTLAPSPS TAVETSGIKV RPAGGAKRRK NKKSDLQRPQ TEVLQLGRTP SRVPQSTQDT
PTKENEKLPF NPNEKQSGKS QYGERLPTEE EKTLSVPTTA YAEGNQLIIE DQRGEIVESL
SLNKVKSNAS SRLDDNLSIH SMDSLRRHLS QYDSADVSSD GDQSEESPIS KKLSRTISGY
KKRTYYRKND PNHRKVYAHQ IDDVIVIENE DGEIIRRYKV NRHPHSISPT QSRKRTGSVV
AASLQFFGLK GKEPENLPAV PVIKIDDGKA SENKLIVQKD EPGIDSALSG ARAQVKLESK
LADMLAKSKV SEASEDSEEE DSDDLQETAV EKRRRLEALG KLPTTHRDHD DEEE
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