| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83454 |
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| Symbol | |
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| ID | 4838631 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 159885 |
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| End bp | 161751 |
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| Gene Length | 1867 bp |
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| Protein Length | 560 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389946 |
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| Product | predicted protein |
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| Protein accession | XP_001383993 |
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| Protein GI | 150864963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
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| TIGRFAM ID | [TIGR00272] diphthamide biosynthesis protein 2
[TIGR00322] diphthamide biosynthesis protein 2-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.171187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTG AAGCAGGAGT TCCAGTTGCG TTATCGACGT ATCAGGATGA ATCAACTTTT
CAATTTGAAC GAGTCAAAGG CTCAGAAATC GTCCGACCCC ATCTTTCACT TGGCAAAAAC
CCCAGTCGAG ATGAGCTTGA ACTGAAAATT ACCGAATATT ATTGTTTAGA CGAACTTGTT
GAAGTACTCA AGAAGAGTAA AGAAGACAAT ATAAGTAGGG AATACAACAG AATCACACTT
CAATTTCCAG ATCTGTTAAT TTGTGACTCT GCCACTATAG TTCATGAGCT TCAGCGTAGA
CTTGGAGTGA GTTTAGAAAG CAGCCTGGAT GTAGCAAAAA CAACTGCAAA CGAAAGTAAT
AGTGACAGCA ATGGATGTGG AAGTTGTGGA TGTACTGGAC CTGATTGCAA TGAAAAAGTT
AATGACGCTG TATCAAGACA AAAGCTCTGG ATATTGGCTG ACACATCCTA TTCTCCATGT
TGTATAGATG AGGTTGCAGC TGAACATGTC AATAGTGATC TTGTGGTACA TTTTGGAGAT
GCCTGTTTGA ACCCCATAGA CAAATTGCCC GCAGTTTATG TTTTTGGGAA GCCGGTGGTG
GATGTTGCCA ATTTAGTGAA TCAATTCAAA ACAAGATATC CTATAGAAGA ATGCCAGCTG
CTGAAGATAT TGCTTATGTC CGACTCCCCG CACACATATA TCTTGAAGCA AGTATATGAA
CAGTTAGCTG TTGAATATCT GGGCTTATGT TATGCTGATT TAGCTTTGGT TCCATCCACT
AAAGCTACAA TAATAGGTTA TAAACCTCAC TCTGTAGTTG ATGCCAAATT CAAAACCATG
AACAGAGCAT TGGTAGGATT GGAAAACGTT GAAGACTATG AAAATGATGA ATTTGACATT
GATACTATAT TGAGCGAGCA TGAGTTGTTC CATATTTCAA CTCCTGAAGC TCCCAGACTT
CTTCAGCTTG TCACCAAGTT TCTGTCAGTT ACATTGTACG ATGCCTTTAC CAAGCAGATC
TCACAGGGTC CATACCCCAA CTTGATGAGA AGATACCGGT ATATGCACAT GGCTCGCTCG
GCTGGTACTG TAGGGTTATT GGTGAATACT CTCTCTTTGG CCAATACGAA GAAATTGATT
AACACGATGG CCAAAAGGAT CAAAGACGCA GGCAAGAAAC ATTACATCTT TGTTGTTGGC
AAGCCAAATG TAGCGAAGTT GGCCAATTTT GAGAATGTAG ACATGTGGTG TGTTTTGGGC
TGCGATCACC AGGGTATTAT TGTTGACCAA AGCAACGAGT ACTTCAAGCC TATTGTTACA
CCTTACGAGC TTCTTCTTGC TCTCAGTGAC GAACTCACCT GGACGGGCAA ATGGATTACC
GACTTCAAGC AGGTTTTGAA ACAAGTAGAT GAAGAAGAGG ATGCAGACGA AGAAGAGAAA
CACGATGAAG ATGATGACGA AGATGCTCCT CCAGAATTTG ATGCAGTAAC TGGAAGATAC
GTCAGTACTT CCAGACCATT GAGACAGCTT CAACACCTTC AGATCTCGTC ACAGGAAGAA
GTTAAAAACG ACGTTGAGTC TAAGGCACTA GTCAACAAGC TCTCATCGGC AGTGGCTATC
AAGAACACCG TTTCTACCTC TGCACAATAT CTCCAAACTC GTCATTGGAC TGGCTTGGGG
AGCGACTACA ATACAGAAGA AGGAGAAATT TCTTCGGCAG GAGCCAACTT GGAAGAAGGA
AGAGGAGGAA TTGCTCGTGG CTACGACTAC GATAGAGAGG TTCATAGTTA ATATGTATAG
TAACATGTAT ATAGAATATA GAATATAGAG GAATACGAAG AGGTAGCTGT GAATCTACCA
GGTTAAT
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| Protein sequence | MATEAGVPVA LSTYQDESTF QFERVKGSEI VRPHLSLGKN PSRDELESKI TEYYCLDELV
EVLKKSKEDN ISREYNRITL QFPDSLICDS ATIVHELQRR LGVINDAVSR QKLWILADTS
YSPCCIDEVA AEHVNSDLVV HFGDACLNPI DKLPAVYVFG KPVVDVANLV NQFKTRYPIE
ECQSSKILLM SDSPHTYILK QVYEQLAVEY SGLCYADLAL VPSTKATIIG YKPHSVVDAK
FKTMNRALVG LENVEDYEND EFDIDTILSE HELFHISTPE APRLLQLVTK FSSVTLYDAF
TKQISQGPYP NLMRRYRYMH MARSAGTVGL LVNTLSLANT KKLINTMAKR IKDAGKKHYI
FVVGKPNVAK LANFENVDMW CVLGCDHQGI IVDQSNEYFK PIVTPYELLL ALSDELTWTG
KWITDFKQVL KQVDEEEDAD EEEKHDEDDD EDAPPEFDAV TGRYVSTSRP LRQLQHLQIS
SQEEVKNDVE SKALVNKLSS AVAIKNTVST SAQYLQTRHW TGLGSDYNTE EGEISSAGAN
LEEGRGGIAR GYDYDREVHS
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