| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83423 |
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| Symbol | |
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| ID | 4838936 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1165486 |
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| End bp | 1167437 |
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| Gene Length | 1952 bp |
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| Protein Length | 405 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390251 |
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| Product | predicted protein |
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| Protein accession | XP_001384523 |
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| Protein GI | 150865346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3774] Mannosyltransferase OCH1 and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.582312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTGAATT TCGCCAACAT ACACGTTACA CCTACGTCTC GTCCTCGAAG ACTCTGTTTC
TGCTTCTGCT AGAGCTTCGC TTCCCCACAT CTGCATTCTG CTTCGCTCCG ACTGCCCCAA
GAGCAACATC CGTGCCGCAG TAGTCAGCGA AAGAAAACAT CCCAGCCCAA CCATCGCCCA
CAGCACGTAT CATTGGACTT GGCTCTTCGC TCCAATCGCT TCGAATCTGC CATTTGTGTT
CAACTGCAGC CCGTGAAACC CAAGAATCTG TTTCTGTTTC TGCTGCAAAG TATTTGAAAT
TGTATGCTAA CATAGCCTGG AATTTTTGGT ATTCTTAAAC GCAATTTCTG TCTGAGCTAC
ACTCAACCCT AGGGCTATCT ATAAAGTATA TATTGCAGTA TTCCCGCTTA TCCCACTATC
CATATCCACA CATAGCACAC TGCTCATAAC ATCCATCACG TAACTCATAC CATTCTCATT
TTCACTTCGC TTCGCACCTG TCATTCTCAT ATAACAATTT TACTATGCGA AAAGAATTGA
AGTACATCAT CTGGGCCCAC GTCGCTCTCG TGGTCTATCT CGTCCACTTG ACCTTTGACT
TGATCACCCT TCTTCACGAC GACTCCTTCA CCGATGGGCT TCTCGACGTC GAGCTCAATC
CGGACAACGG CATTCTTGAT CGTCCCATGT TGATTCCCAA AATCATCCAC CAGACCTACA
AAACTACAGC CATACCAGAA ATATGGAAGC CTGGCCAACA GGCCTGTCTC GACTTGCATC
CAGACTACAA ATACATCCTC TGGACCGACG AGATGGCTCG TGAGTTCATT CTGGAAGAGT
ACCCCTGGTT TCTCAAAACG TGGGACTCGT ATCCGTATCC CATCGAGAGA GCCGATGCCA
TCAGATACTT TGCTTTGTTC CATCACGGCG GTGTCTATAT CGACTTGGAC GATGGCTGCG
AACGTAGGCT TGATCCTCTT TTGACTGTTC CAGCGTTTGT AAGAAAGACT GTTCCTACTG
GGATTTCCAA CGACGTTATG GGATCCATTC CCAAACACCC TTTCTTCCTC AAAGTGTTGG
ATTCTCTTCA GGCGTACCAG CGCAACTGGT TGGTGCCTTA TATCACGATC ATGTTCTCCA
CGGGTCCGTT ATTTCTCTCG GTTATTTGGA AACAATACAA GCGTTGGGGA GTTCCTGAGG
CCGGAAAAGT ACGCATTTTG ATGCCTGACG ATTACAAAAC CCACCCTTAT TCTTTCTTTG
CTATTGCTCC AGGTTCTTCG TGGCATTTGG ACGATGCTAA GTTCATCAAA GGAATGGCCA
ACCACATCGG TTTGGCCGTT TTCGCGGGTT TTTTGATCGC TGGACTTGTC TTCTATCTTG
AATACTTATT TTATTCGTGG ATTATCTCGA ATCACTTCAA GAAGTTGATG GTGAGTTGCA
CAAAATTCCT CTACACGTTG GCTAGTCCAG TAATCAACGT CTTCCACAAG CACACTCCCA
AGGCTTCTGC CAAAGGAGAC GGCGAGGAAC GAGTCAACTT GCTCAATCTC ATCAGAGGCA
AGTTGAACAA AAATATCAAG AGAAGATCCA GAAAAGACTC CAATCTCCCT ATCGAATTCT
CGATCTTGGA AAAATTGGAT AACGAGACAA GCGACGTTAT ATTTGTTAAC GAACGAGGCT
CGGCATCCCA AGAACTTAAT GAAACCTATG AAGACAGTCA TTTTAATCAG ACTGCTCACG
CAGAGCTTAT AGACAACTCA TCCTCTGCGG AGCAACATCA TGATGGTGAA TCGTACATTA
CTAAGAATAA TGACGATATA GTGTGATAAT TACTAATTCG ACTAATGAAC TAATGAACCA
ACTTTTCTTT CTTTCCTTCT TCCACAGGAC TAATGTTAGA TCACCATCTC ATACATTATA
CACATACATG TTAATACATT AATCTCTTCT TG
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| Protein sequence | MRKELKYIIW AHVALVVYLV HLTFDLITLL HDDSFTDGLL DVELNPDNGI LDRPMLIPKI
IHQTYKTTAI PEIWKPGQQA CLDLHPDYKY ILWTDEMARE FISEEYPWFL KTWDSYPYPI
ERADAIRYFA LFHHGGVYID LDDGCERRLD PLLTVPAFVR KTVPTGISND VMGSIPKHPF
FLKVLDSLQA YQRNWLVPYI TIMFSTGPLF LSVIWKQYKR WGVPEAGKVR ILMPDDYKTH
PYSFFAIAPG SSWHLDDAKF IKGMANHIGL AVFAGFLIAG LVFYLEYLFY SWIISNHFKK
LMVSCTKFLY TLASPVINLN KNIKRRSRKD SNLPIEFSIL EKLDNETSDV IFVNERGSAS
QELNETYEDS HFNQTAHAEL IDNSSSAEQH HDGESYITKN NDDIV
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