| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83377 |
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| Symbol | ECM3 |
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| ID | 4838837 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1724951 |
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| End bp | 1727313 |
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| Gene Length | 2363 bp |
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| Protein Length | 557 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390152 |
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| Product | membrane protein |
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| Protein accession | XP_001384639 |
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| Protein GI | 150865426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGGATTCCA CAGCATCAGC AGAAGTCTTT GAAATGCCCC AAACGGTATC CATACTTAAC
TGTTTGTAAG AAAAGAGCAA CTACACCCGC GCCGGAATAC AAATCCCCCA AACTCGGCTT
GATATTCCAT ATATAGGTTG TTGTTCCGTA TCTTTCTACC CCATTAAACC ATCGCAAAAT
AACTTAAGTA CTCCACATTT TCCATCTTGA GAGCAGCTTT TCTCCCTTAT ACCTATCTCG
GCTTCATAAT AGACGATAGT CCATTACTTA AGGAAAGACC AAAGTAACAG TTATTCTATC
ATTCCTGACA TAATCGGACT TGCGATTTCA AATTTTTCAG CCATCTCATA ATACAAACTA
AAACCAGCGT TGGATTTTGG CGTTAGTTAC AATAGAATAT TGTTCGAATA CCAACGTGAC
TAAAGCAACG TCACGTACCT AACAAAAAAG ACCAAAGCCA TGTCTGAACA GCATCCATTG
GGGCTCATCA TCTATGCAGC CACAAAGCCC ATCTTCAAAA TCTACTTCAT CATAGCCTTG
GGCTATTACT TGGCAAAGAA GAACATTCTC ACGGTGACGA CATGTCGTGA TATTGCCGAC
ACCATTGTAA CAGCCATTAT GCCCTGTTTG ATCTTTGAAA ATGTTGTCAC CAACTTGAAA
AGTTCAGATA TCAAGAACAT AGGCATAATT TTTTTCTCGG GAACCTTGTT ATTTCTCATT
GGAGCCGTTT TTGGCTTCCT CACCTACTTT GTAACTGGCT CTCCACGTAG GTGGATGGGT
GGGTTGATCT CTGTTGGACT TTTTCCCAAT ATCTCCGATT TGCCCATTGC CTACTTACAG
ACCTTGTCGA AAGGAGATGT TCTTTTCACA GCTGACGAGG GAAGTAAAGG TGTAGCATAT
GTTTGTATCT TTCTCGCCTC ACAAGTGTTC TACCAGTTCA GTTTAGGCTT GTATAGACTT
ATCGAGTGGG ATTTCCGTGA AGAGCTCTTG GACAATAATA AAGAAGAACA AGATGACGAA
TGTGCCATAG ACTCTTCAAG TGAAATGGAA TCTCCCGCAA AAGAACAACA AGTCCCAGCT
ATAATAACAG ATTCTACTGG TCCATCAGCT GGTGATACAA CACAGATGAA CCAGAATGAC
ACTCTTTCAA TTCTGAGCAG CATCAACTCA TCTAGCTCTA GAACAATTTC TCAAGAAGAC
AAAGAACCCG GTAACAATGA TTCAGAAGTC CGTCAACGTA TGCGTTCTCA GCAGCAGACA
CAGGAAGAAG AAGAGGATAT GCAGCACACG GAATTTCTTA GAGTAAGGCA GTTGGAAAGA
ATAGCTTCTT TACCCAGATC CATATCTACA GAAGGTAGTC GTCTGTCTAG GAGGTCTAGA
AGAGATTCCA TAGCCAGCTA CAATCCTCTT CAAATGATTC CATCCAGAAC AGCAGAGCTA
AGGAAACAAA AGTCCCAGGA TATTCATGAT GTCATCAACG AATACTCGGA ATTCGAAGCC
TTGAGAGATA GCGAAGTCAA GCGTACAGTT TCAGGTACGA GCCAGCTTGG GTTGGATATA
GTTCGAAATC CTACAATCGA TGGCCAGTTG AAAGCCCCTG AAAAGCAGAG AAGTAAATTT
GTGCAGAGGC TTATTGAAAT CGGGAAGAAC TTCCTCACCC CCAATTCTTT GTCACTTATC
ATTTCTCTAG CCATCGCCAT GTCCCCTCCT TTAAAAGCGT TGTTCGTAGA ATCTAATCAG
GTTCACATCC ACCCTGCCCC AGATGGCCAA CCTCCGTTGT CATTTGTGAT TGATCTTACA
AGTTATATTG GAGCTGCCTC TGTGCCGTTG GGCTTGATTT TGTTGGGTGC CACGATTTCA
CGGTTGCAAG TCAAATCAAT GCCTAAAGGT TTCTGGAAGA CAGCAGTGAT GATAACAGCC
TCGCGGTTGA TTCTTATTCC AATTTTCGGT GTCGGCGTCA CCACAGGCTT CTACAAAGGT
GGCTGGTATG GAGATGATAA GTTAATTCGT TTTGTCAGTG TGCTTGAGTT TGGATTGCCC
AATGCGACAG CCTTGGTGTA CTTCACAGCT TTCTACACTG ACCCCAAATC TGAAGATCAC
TTGCAAATGG ATTGTTTGGC TATTTGCTTG ATCTTTCAGT ACGCAATTCT TTGTGTTACA
CTCCCATTTC TTATTACTTT CACCCTCCGA GTCTCGCTCG GGATGTGACG TGACGTACCC
ATGCCAGCGA GAAAACCTCA ATATGTTCGA AAGACCATTC AGCTTGCATT ATCTTTTTCT
CACCATTGCA TTATATTCTC TGGTTTGTCA GACATAGAAC CGAGTACAAT TAATATAGGT
ATAATTAATA GATATATATA CAT
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| Protein sequence | MSEQHPLGLI IYAATKPIFK IYFIIALGYY LAKKNILTVT TCRDIADTIV TAIMPCLIFE
NVVTNLKSSD IKNIGIIFFS GTLLFLIGAV FGFLTYFVTG SPRRWMGGLI SVGLFPNISD
LPIAYLQTLS KGDVLFTADE GSKGVAYVCI FLASQVFYQF SLGLYRLIEW DFREELLDNN
KEEQDDESII TDSTGPSAGD TTQMNQNDTL SISSSINSSS SRTISQEDKE PVRQRMRSQQ
QTQEEEEDMQ HTEFLRVRQL ERIASLPRSI STEGSRSSRR SRRDSIASYN PLQMIPSRTA
ELRKQKSQDI HDVINEYSEF EALRDSEVKR TVSGTSQLGL DIVRNPTIDG QLKAPEKQRS
KFVQRLIEIG KNFLTPNSLS LIISLAIAMS PPLKALFVES NQVHIHPAPD GQPPLSFVID
LTSYIGAASV PLGLILLGAT ISRLQVKSMP KGFWKTAVMI TASRLILIPI FGVGVTTGFY
KGGWYGDDKL IRFVSVLEFG LPNATALVYF TAFYTDPKSE DHLQMDCLAI CLIFQYAILC
VTLPFLITFT LRVSLGM
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