Gene PICST_83340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_83340 
SymbolDAO2 
ID4838679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp823591 
End bp824930 
Gene Length1340 bp 
Protein Length378 aa 
Translation table12 
GC content41% 
IMG OID640389994 
Productd-amino acid oxidase 
Protein accessionXP_001384459 
Protein GI150865303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGAAATGTCT GCCACCACAC CTTCTAAGCC TAAGGTGGTA ATTGTAGGAG CCGGAGTTCT 
TGGACTCTCT ACCGCGTTGG TGCTCTGTGA GAAATTCACG CATCCACAGT TAGAAATAAC
GGTTATAGCC GAATATGGAC CCCATGATTT ATCCATGAAC GCGGGATTGA CTAACTATCC
CCTTTACACT TCCCCTTGGG CAGGTGCACA TTTCCGTCCA TTCCCCAGTA AGAATATCCA
GGAAGAACGG GAATCTAAAT TGACCAGATT GACATTGCAG AAGTTCAAGG AATTGGCCAA
ACTGAATCCT GAAAGCTCCA TTGAGTTTGT TCAGGGCATC GAGTATTTCG AGAAGCCTGA
TCATTTCTAT AAGGAAATAG CACCAGGTTT CTCCAATGAA ATGGACAATT TCTCAGTATT
GCCTACCAGT AGTTTACCAG AAGGAGTAGA GATGGGAGTC AAGTACGATA CCTGGGTGGT
CAATTCACCA TTATATTTGC AATTCTTGTA CAGAAAGCTC AGGTTCCAGT ACAAGGTCAA
CTTCATTCTC ACCAAACTAA CATCTCTTAG GCATGTTAAT AGTTTTGTTT CCGGTAGTCC
AATAATCATA AACTGTAGTG GCAATGGTTT GCAGTACGAT GGAGGTAACG ATCTATCCAA
TTTTCCTATT CGTGGCCAAA CTCTCTTGAT CAACCCTCCT TCTGATTGTA AATTCCTTCA
TACTACCATC ACTCATCAGC TGAAGGAAAA TCTATGGACA TTTGTCATAC CTCGTCCCTT
ACACGGAGGT ATTATATTGG GTGGAACCAA GCAGGTCGAC GAATCGTTTA CTGGGGTACG
AGATGAAGAT ACCAGAGCGT TGCTTGAAAG GGGTCGGAAA TTGTATCCTG AGCTCATGAA
GGAGAACCCA GAAACAGGAG AGAAATATTT CGATATTGTT AGAATCAATG TCGGGTTACG
GCCTGCAAGA AAGGGCGGTT TGAATCTCAG TGTTGAGCTG AAGGACGTGT ACTTGGATAG
AGCTAACCAC GTTATTAACA ATTATGGAGC AGGAGGAATG GGCTATGAAT TGTCGTATGG
AGCTGCAATT GCAGTCTATG AGAAGTTGTT ACAATTGGTC TCTTCCAAAC TGGCTCTTTA
ATTAAGCAAG GAGCTATCCA TATTCGGATA TAGTTGCACT AAACATTAAA AAATTCTGAT
AGCTCAGAAG TAGATTTTTA GAACGGCAAC TGTATTCGGT ACACCCTGTC TTATTGATAT
TCAAGATCAA TATAGAAAAT AGATCAATAC AAAATAGTAC TATTTCCAAC GTTGCTTCCT
AACAATATAT AATTTTCGTT
 
Protein sequence
MSATTPSKPK VVIVGAGVLG LSTALVLCEK FTHPQLEITV IAEYGPHDLS MNAGLTNYPL 
YTSPWAGAHF RPFPSKNIQE ERESKLTRLT LQKFKELAKS NPESSIEFVQ GIEYFEKPDH
FYKEIAPGFS NEMDNFSVLP TSSLPEGVEM GVKYDTWVVN SPLYLQFLYR KLRFQYKVNF
ILTKLTSLRH VNSFVSGSPI IINCSGNGLQ YDGGNDLSNF PIRGQTLLIN PPSDCKFLHT
TITHQSKENL WTFVIPRPLH GGIILGGTKQ VDESFTGVRD EDTRALLERG RKLYPELMKE
NPETGEKYFD IVRINVGLRP ARKGGLNLSV ESKDVYLDRA NHVINNYGAG GMGYELSYGA
AIAVYEKLLQ LVSSKSAL