| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83317 |
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| Symbol | |
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| ID | 4838887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1551387 |
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| End bp | 1553174 |
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| Gene Length | 1788 bp |
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| Protein Length | 573 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390202 |
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| Product | predicted protein |
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| Protein accession | XP_001384602 |
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| Protein GI | 150865401 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000217619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG TCTTGTCTCG CTCTGAGATC ATAGACATGA TCACAGATGG AAAAGCCATA
GTCATTTACA AGAACAATGT CTTGAACCTC ACTCCATGGA TCCCAAGACA CCCTGGAGGT
GAAATGGCTG TCTACCACAT GATTGGACGC GATGCCACAG ACGAGATGAT CGCGTATCAC
AGCAAAGAAA CAGTAGATAC CTTCACGAAA TGGAAAGTAG GCAAGATCGA CTACTACTGG
GAGAATTTGC TCCCACCGAT CCAGGGTGCT GTATACCGTA AAGAGAGCAT CACTGGCCAA
AGTCGAAGCG TTCGTGAATC GTTGGACAGC AAGTTGGATA ACGAGTCTAC CAGTTCGTTT
GAAGAGATAG GAACCTCGAT TTCGTCTTCC ACCAGTTCCA TACCAGACAC AGCTATAGAA
GAGTACAAGG GTTTGGGATA CCCTTCTGCT GTTAAACCAG TTGTTCCGCA AAATATGTTG
ATAACAGAGG AGAATAAGAA CACCTTGTTT CCTGTGACTG AAGAAATCAA TCCGAAGAGC
TCTGCTATAG TAAACCCAAA AGTATTGATG CACAATTACG ATAATGGACT TACCCATCAA
GATCTTGCCA GTTTGCCTTC CTTGGATTAC AAAACTCAAC AACATCTTCG TGACAAATAC
ACAGAGTTGC ACGAGCTAGT CATTAGAAAC GGACTTTATG ACTGTAATTA CTGGGATATT
TTTAGAGAAT TGGTGAAGAT TGGCAGCTTG TTTCTCTACT CTTTTTCTTT CTTGAAGCTT
AACTGCCTCT TCTTATCTGC TGTTTGTATG GGGATGGCCT GGCACCAGAT GACTTTCATT
GCTCATGATG CTGGACATGT ATCTATCACT CACAACTACC AATTCGACAA TTTATTTGGT
ATGGTCATAG CTGATTGGTT TGGTGGATTG AGTCTTGGTT GGTGGAAGAG AAATCACAAT
GTGCACCATT TAATCCCCAA CGATCCAGTG CATGATCCGG ACATCCAACA CCTCCCTTTT
TTCGCTGTCA GTGTCAGGTT ATTCGACAAC GTCTACTCTA CATACTACAA ATGCTTCTTG
TGGTTTGACA AGGCAGCTGA AATCTTCATT CCTTTCCAGA ACTACTTGTA CTATCCTATC
TTGAGTTTTG GCAGATTTAA CTTGTACTTC TTGTCGTGGC TGCATTTGAT CAGAGGGCTC
GGCCCAAGAC ACGGCAAGGC TGCTTGGTTC AGATATTTTG AGATCTGTGG CTTGAGCTTC
TTTTTCTACT GGTTTTTCTA TCTTGTAGTT TACAAGTCGA TCGATGGAGG CTGGAATAGA
TTCAACTATG TTCTTGTCAG TCACGTTGCC ACGATGTTGG TCCATGTGCA AATCACATTA
TCACACTTTG CTATGTCGAC CTCAGACTTG GGCGTCAGCG AATCGTTTCC TTCTAGACAA
ATCAGAACAA CCATGGATGT CGATTGCCCA GAATGGCTAG ACTTCTTGCA CGGAGGATTG
CAATTCCAAG CCATCCACCA CTTGTTCCCA AGAATGCCTA GACACAACTT CAGAAGAGTA
CAACCGTTAG TGATCAAATT CTGTGAAGAT GTAGGTTTAT CCTACTCAAT CTATGGCTTT
GGTGAAGGTA ACGAGATTGT CATTGGTAAA TTGGGCGACG TTGCTAAGCA ATGTTCGATA
CTATTGGATG CTACTAGAAA GTACGATGGT GATTTGTACT AGATATAAAT ATAAATATAT
ATATAGATAT GGCAATATAA ATAGCTACGA GAAAATAGTA GCTCTGAC
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| Protein sequence | MSKVLSRSEI IDMITDGKAI VIYKNNVLNL TPWIPRHPGG EMAVYHMIGR DATDEMIAYH
SKETVDTFTK WKVGKIDYYW ENLLPPIQGA VYRKESITGQ SRSVRESLDS KLDNESTSSF
EEIGTSISSS TSSIPDTAIE EYKGLGYPSA VKPVVPQNML ITEENKNTLF PVTEEINPKS
SAIVNPKVLM HNYDNGLTHQ DLASLPSLDY KTQQHLRDKY TELHELVIRN GLYDCNYWDI
FRELVKIGSL FLYSFSFLKL NCLFLSAVCM GMAWHQMTFI AHDAGHVSIT HNYQFDNLFG
MVIADWFGGL SLGWWKRNHN VHHLIPNDPV HDPDIQHLPF FAVSVRLFDN VYSTYYKCFL
WFDKAAEIFI PFQNYLYYPI LSFGRFNLYF LSWSHLIRGL GPRHGKAAWF RYFEICGLSF
FFYWFFYLVV YKSIDGGWNR FNYVLVSHVA TMLVHVQITL SHFAMSTSDL GVSESFPSRQ
IRTTMDVDCP EWLDFLHGGL QFQAIHHLFP RMPRHNFRRV QPLVIKFCED VGLSYSIYGF
GEGNEIVIGK LGDVAKQCSI LLDATRKYDG DLY
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