| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83166 |
|---|
| Symbol | PYK1 |
|---|
| ID | 4838806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 1684551 |
|---|
| End bp | 1686137 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640390121 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | XP_001384628 |
|---|
| Protein GI | 126136208 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTCGTATATA TATAACTTCA CCCATATATA TACCAATTCG CAATGTCGTC TTCTTCTCTC
GCCTGGTTGT CCCAATTGAA CACCACCGAC ACCCCCGACA AGGTGCTCCG TCGTTCCTCC
ATCATCGGAA CCATTGGCCC AAAGACCAAC TCTGTCGAAG TCTTGGTCAA GTTGAGAAAG
GCCGGTCTTA ACATCGTGAG AATGAACTTC TCCCACGGCT CGTACGAGTA CCACCAGTCG
GTCATCGACA ACGCTAAGAA GTCCGAAGAA GTGTATGTTG GCCGTCCACT CGCTATTGCC
TTGGACACCA AGGGCCCAGA AATTAGAACC GGTACTACCG TGGATAATGT CGACTATCCA
ATTCCACCTA ACCACGAAAT GATCTTCACC ACCGACGACG CCTACAAGAC CAAGTCTGAC
GACAAGATCA TGTACATCGA CTACGCCAAC ATCACAAAGG TCATTGAAGT CGGCAGAATC
ATCTACGTTG ATGATGGTGT TCTTTCCTTC GAAGTGTTGG AAATCGTTGA CGAAAAGACC
TTGAAGGTCA AGTCCATCAA CGCTGGTAAG GTCTGCTCGC ACAAGGGTGT CAACTTGCCA
GGTACTGACG TCGACTTGCC AGCTTTGTCT GAAAAGGACA AGGCCGACAT CCGTTTTGGT
GTCAAGAACG GTGTACACAT GATCTTTGCT TCGTTCATCA GAACCGGGGA CGATATCAAG
GAAATCAGAA GAGTACTTGG TGAAGACGGT AAGCAAATTC AAATCATTGC TAAGATCGAA
AACCAACAGG GTGTCAACAA CTTCGACGAC ATCTTGGCTG AAACCGACGG TGTCATGGTT
GCTAGAGGTG ACTTGGGTAT TGAAATTCCA GCTCCTCAAG TTTTTGTTGT GCAAAAGCAG
TTGATTGCTA AGTGTAACTT GGCTGCTAAG CCAGTCATCT GTGCCACCCA GATGTTGGAG
TCTATGACTT ACAACCCAAG ACCAACCAGA GCCGAAGTCT CCGATGTCGG TAACGCCATC
TTGGATGGTG CTGACTGTGT CATGTTGTCT GGAGAAACCG CTAAGGGTGA CTACCCATTC
GAAGCTGTTT CCATGATGCA CAACACTGCC ATCATTGCTG AAAAGGCTAT CTCTTACCAG
TCGTTGCACA ACGAACTCAG AGTCTTGGCC AAAAAGCCAA CTCCTACTTC CGAAACCTGT
GCTGTAGCTG CCGTTTCTGC TGCCTACGAA CAGGACGCTA AGGCTATCGT TGTCTTGTCC
ACTTCTGGTT TGAGTGCCAG ACTCGTGTCC AAGTACAAGC CAAACGTGCC AATCATGATG
GTTACCAGAA ACGAAACATC CGCCAGATAC TCCCACTTGT ACAGAGGTGT GTATCCTTTC
ATCTACACCA AGGAAAAGGT TGCTAACTGG CAAGAAGACG TCGAAAACAG ATTGAGATGG
GCTGTTTCCG AAGCCATTGA GTTGGGTATC ATCCACAAGG GTGACTCTAT TGTCACTGTG
CAGGGTTGGA CTAGAGGTTC AGGTCACTCC AACACTGTCA GAATCGTTCA AGCTTAGATA
TCATAGTAAT AAAAGACAGT AATTGAG
|
|---|
| Protein sequence | MSSSSLAWLS QLNTTDTPDK VLRRSSIIGT IGPKTNSVEV LVKLRKAGLN IVRMNFSHGS
YEYHQSVIDN AKKSEEVYVG RPLAIALDTK GPEIRTGTTV DNVDYPIPPN HEMIFTTDDA
YKTKSDDKIM YIDYANITKV IEVGRIIYVD DGVLSFEVLE IVDEKTLKVK SINAGKVCSH
KGVNLPGTDV DLPALSEKDK ADIRFGVKNG VHMIFASFIR TGDDIKEIRR VLGEDGKQIQ
IIAKIENQQG VNNFDDILAE TDGVMVARGD LGIEIPAPQV FVVQKQLIAK CNLAAKPVIC
ATQMLESMTY NPRPTRAEVS DVGNAILDGA DCVMLSGETA KGDYPFEAVS MMHNTAIIAE
KAISYQSLHN ELRVLAKKPT PTSETCAVAA VSAAYEQDAK AIVVLSTSGL SARLVSKYKP
NVPIMMVTRN ETSARYSHLY RGVYPFIYTK EKVANWQEDV ENRLRWAVSE AIELGIIHKG
DSIVTVQGWT RGSGHSNTVR IVQA
|
|---|
| |