Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83076 |
Symbol | |
ID | 4839045 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 863611 |
End bp | 865467 |
Gene Length | 1857 bp |
Protein Length | 470 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390360 |
Product | predicted protein |
Protein accession | XP_001384467 |
Protein GI | 150865310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.569663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTTTCTTTTT ATATTTGATT TACTGAAGTG GTGGACATAC TATTTGTGAA CAAAATCTAC CAATTTAAAA ATCGGCTTTC CTTATAAATT TTTGTCTTGC CTATGACATT TGGCATTCAA TAAAAGTGAA GAAGAGGAAG ACCAAGGAAT ATTGAAATAC AACAACTTAA ACAAGTAGAT AAGAGATACG AAAAGTGCAA GGATAATAGC AAGATAACCT TCAGAGATGT CAGAACTATC AAGCAGCAAC TCTTCGGATG GTTCTGAGTC ACAGAGCATA AATGATGTCA CCAGTGTCAA TGTAAAGTAT GATGATTCTG TAGAAATCAA GTCTTATGCT ACTTCGTTTG ATTTATTGAC TCTGGAGTCT AGACCTGATC TCAGAAATAC CAAATATAAA TCTTCTACCG ATCATTTGAA TTGTCCCATT TGTCAGCAAC CTTTTATGGA GCCTTTGACT ACGATCTGTG GCCATACTTT CTGTAAAGAA TGTATCTATG AATGTTTGAA AATGGCGAAA AGCAACCAGC AGAGCTCTGG CAGCGATAGT TTGTCAGGGT ATTGTCCACT TGACCGGACG CCAATTGACT CCGCCAACAT AAATGATTTG TTTCCTACTC CATTGTTGAT TTCCAACTTG ATTGACGACT TGAAAGTGTA CTGCTTGAAT CACGAAAGAG GCTGCGAATG GGATGGAAGT CGCTGGGAGC TCGAGCGTCA TGTTTTGATA GATTGTGGAT TTACAGGAGT GAAATGCGGA GGTGTCAGAT ACGAGAATAG TGATGTTCGA CAAGAATCTA AAGAATCTGT GCCAGAAAAT GCTGTTTGCC AGTTGCTTAT AGAGAGAAGG TTTGCTGACG AAAACCATGG CTGTTCCCAC CAGGTATTTC AGTGCAATTT CTGTAATCAG GAACTCACCA AGATGACTGA AAGTGACCAT TTGGAAAATG AGTGTTTGTT CAATTATCAG ACATGCGAAT TGTGTTCCAA CGATATGATT CCCTTGAAGA ACTTGAGCAA ACACCAGGAG AATTGCTCCA AGATTGGTAT GGTCAAATGT CCTGCTCACG AGATAGGATG CAAGTGGGTT GGATCCAATG AAACTTCGCT AGAGATTCAT CAACAGGGCA ACAACTGTCA GCTTAGCCAT TTCTTACCTT ACTATCACAA GATAAACGAC AAGGTGGATC TGCTTACAGA GGAGAACAGG TTCTTACAGA AACAAATCAA CAAGATCTTG GACTCAATCG TTCAAGGAAA GATTACTAAT TTGGGCTACA ACGAGTCTAT CGAGGAGATC AACAAGTTCA AGACAATCGA AGACCAGGAC AAGCTCTTGT ACCTCAACTT TGAGATTGAT AGGTTGAAAT TTGAGTTTAA CGAGAAGATC ATGCCGTTCA TCAATAAGCA CACCATGAAT GAACAGGAAA CTGTGATCAA CAATTTGACT CACGACAACT TCATGATGAA AGAAGACTTA AATTTGCAGA GGGTGTTAAT CAACAGCTTG AGAAAACAGT TGCAATTCCT TTTGTTCTCG CGCAACAGTG CCAGAACCGG GGCATTTGGT ACAGGCGGCA TGGTGGGCTC GATGGGAGCA GCTCCTAATG TTCTTCTTAT GGATGACGTT GCCAACGAAC TTCTTGAAGC ATCTTCACGG AGCAGTTCCG AGGAGCGGTT GAACTTGAAA TTGTAGCACT AGCAAACAGA TCAAGAGAAT GCAATCAGAA AAGGAAAGTG TTGCGATTTG GATTTTTATG ATTTACGAGA GAAGATTACT AGCTGATAAC GAAAATGACA TTACTGACGT TTCTGAGTTA GCGACGACAT ATAGATAAAA ATTTAATAGA ATGGATT
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Protein sequence | MSELSSSNSS DGSESQSIND YDDSVEIKSY ATSFDLLTSE SRPDLRNTKY KSSTDHLNCP ICQQPFMEPL TTICGHTFCK ECIYECLKMA KSNQQSSGSD SLSGYCPLDR TPIDSANIND LFPTPLLISN LIDDLKVYCL NHERGCEWDG SRWELERHVL IDCGFTGVKC GGVRYENKNA VCQLLIERRF ADENHGCSHQ VFQCNFCNQE LTKMTESDHL ENECLFNYQT CELCSNDMIP LKNLSKHQEN CSKIGMVKCP AHEIGCKWVG SNETSLEIHQ QGNNCQLSHF LPYYHKINDK VDSLTEENRF LQKQINKILD SIVQGKITNL GYNESIEEIN KFKTIEDQDK LLYLNFEIDR LKFEFNEKIM PFINKHTMNE QETVINNLTH DNFMMKEDLN LQRVLINSLR KQLQFLLFSR NSARTGAFGT GGMVGSMGAA PNVLLMDDVA NELLEASSRS SSEERLNLKL
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