| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77798 |
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| Symbol | |
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| ID | 4838798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 82273 |
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| End bp | 84582 |
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| Gene Length | 2310 bp |
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| Protein Length | 605 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390113 |
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| Product | predicted protein |
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| Protein accession | XP_001384314 |
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| Protein GI | 150865197 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATATTTATTA TCATTAGAGC CAACTACCAG TTATCGAAGT TTCTCGTAGT TGCCGCATAA
CAGCATTTGT GAATTATCAT TCTTTTGCTG TATTTTACTC AAATATCTCC GGATTTTTAT
ACTCTTGTGA GATTTTTCAG TGCAGAAAGC GAACCGGTTC TTGTTATTTG TAAGACAATA
AGGTCGCTAG AATCGTTACC ACGGCTCAAA GTTCTTCGGA AAGGATTCAG TTTTAGTTGA
TTTGGTATTT TACTCAATTT TGACACAATT CAAGAGAATC AACAGTGTAT CATATTCAAC
TGGAATCATA GAAGAATACA CACATCGAAA CATAACGACT ACTATCAAGG GTCTATTTAT
CATAATCTTC GTCTATTTTA AATAGTATAC AACTTTTGTA TACTTTCCTA ATCTAAGAAC
CTATAATTAA TATGTCTTTT GTTGGAGGTG GTGCCGACTG TTCTGTCAAC GGCAATGCAA
TTGCTCAGTT CAACAAACAT ACACAACAGG ACAGATCTCT CCAAAGACAA GCGGCAAACC
AGCCAGCAAT CTTGCAGAGT CAGGGCTTCA AACAAGAGAA TCTTATGAAT GCTCGTGATC
GCCAGAATTT GGACAACTTC ATGAATGCCA ACAATGGCCA GAACAGCTTC CAGTTCCAAC
CAATGAGACA CGAGTTGAAC ATGATTCACA ACCACCAACA GCCTCAACAC CAGCATAACT
GGCTGGCCGA GTTCAAAACT CATTCTCCTT CGCCAATTCC GCAGGTAGCC GCTCCTATTG
CTCCTATTGC CAAGACTGGT TCTCCATTAA ACGCCCAATG GGCGAACGAG TTTCAACCCA
TGGATCAAGC AGTGGCTCGT CAGAATCCAC AGCAAATGAA CGCCATGCCC TCTATGATGA
TGGGAGCCTA TAGGCCTATG ATGAGCATGC CTATGATGAC AAACAATGTT GCACAGCAGC
AACAGCAAAC ACCTCAGAAC CAGGAAGTAC AGGTTGACTG GGATGACCAT TTCAAGCAGA
TGGAAGAACT CGATAGTAAG GTGGAAGAAA AGATTGAAGA AGCTACAGCT GATCCCGAAG
AGATCGCTCG AGAAGCCTCG CCAGATTTCG TCATTGACGA CAAATACCAG GCTACTTTCC
AAGAAGTATG GGATGGGTTA AACAGCGAAG CAATAGAAGC GGATTTCATC AGCCAGCAGT
ATGAAGACTT CAAGAACACA CAGAAAGAGA CTTTCCCACC AGATATGAGT CAATGGGAAA
AAGACTTTTC TCGTTACGTT TCCACCAGAG CTCATTTTGG AGACTATCAA TTTGAAGATA
GGCAGAATAA CCAATTCTTG GATTTGCCAG CTGAGAATGA CCCTTATGAA ATTGGCTTAC
AGCTTATGGA AAATGGTGCC AAGTTGTCAG AGGCTGCGTT GGCATTTGAA GCTGCTATTC
AGAGAGACGA GGGGCACATC AATGCCTGGC TCAAATTGGG AGAGGTGCAA ACCCAAAATG
AAAAGGAGAT TGCAGGTATT TCAGCATTGG AAAAGTGTTT GGAATTGAAT CCTGAAAACT
CCGAGGCTTT GATGACGTTG GCTATATCCT ACATTAACGA AGGCTACGAC AATGCTGCAT
TTGCCACCTT GGAAAGATGG ATTTCTACTA AATACCCTCA AATTGTAGAC AAAGCTCGTG
CGCAAAACCC AGAAATTACC GACGAAGACA GATTTTCGTT GAACAAACGT GTCACTGAAC
TTTTCCTCAA GGCTGCTCAG TTATCGCCTA GTGCAGCTAA CATGGACGCA GATGTTCAGA
TGGGTTTAGG TGTCTTGTTC TACGCAAACG AAGAGTTTGA CAAGACTATC GACTGTTTCA
AAGCAGCATT AAGTATCAGA CCTGACGATC CTGTGTTGTG GAATAGATTG GGTGCCTCGC
TTGCTAATTC GAACCGTTCT GAAGAAGCCG TAGATGCATA CTTCAAAGCT TTGCAGTTGA
AGCCTACCTT TGTCAGAGCC AGATACAATT TGGGGGTGTC TTGTATCAAC ATCAGATGCT
ACAAAGAGGC AGCTGAGCAT CTCTTGAGTG GTTTGTCCAT GCACCAAGTG GAAGGCGTAG
AGAATGACAG CACACTCAAC CACAACCAAT CTACAGCTTT GACAGAGACC TTGAAGAGAG
CATTCATTGC TATGGATAGA AGAGACTTGT TAGAGTTGGT CAAGCCTGGA ATGGACTTGA
CTCCGTTCAG AAAGGAGTTC AACTTCTGAG GATACGATAC ATAGTAATGC TTATATGGGT
ATGTAGGTTA AATATTTATA CTTACAAAAT
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| Protein sequence | MSFVGGGADC SVNGNAIAQF NKHTQQDRSL QRQAANQPAI LQSQGFKQEN LMNARDRQNL
DNFMNANNGQ NSFQFQPMRH ELNMIHNHQQ PQHQHNWSAE FKTHSPSPIP QVAAPIAPIA
KTGSPLNAQW ANEFQPMDQA VARQNPQQMN AMPSMMMGAY RPMMSMPMMT NNVAQQQQQT
PQNQEVQVDW DDHFKQMEEL DSKVEEKIEE ATADPEEIAR EASPDFVIDD KYQATFQEVW
DGLNSEAIEA DFISQQYEDF KNTQKETFPP DMSQWEKDFS RYVSTRAHFG DYQFEDRQNN
QFLDLPAEND PYEIGLQLME NGAKLSEAAL AFEAAIQRDE GHINAWLKLG EVQTQNEKEI
AGISALEKCL ELNPENSEAL MTLAISYINE GYDNAAFATL ERWISTKYPQ IVDKARAQNP
EITDEDRFSL NKRVTELFLK AAQLSPSAAN MDADVQMGLG VLFYANEEFD KTIDCFKAAL
SIRPDDPVLW NRLGASLANS NRSEEAVDAY FKALQLKPTF VRARYNLGVS CINIRCYKEA
AEHLLSGLSM HQVEGVENDS TLNHNQSTAL TETLKRAFIA MDRRDLLELV KPGMDLTPFR
KEFNF
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