Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77786 |
Symbol | |
ID | 4838469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 799214 |
End bp | 801692 |
Gene Length | 2479 bp |
Protein Length | 675 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389784 |
Product | predicted protein |
Protein accession | XP_001384111 |
Protein GI | 150865058 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.154992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGCTTCTACG TGTCAGATTC TGTATCTACC TAGTAGCTCA CGATAATTCA TAATAGTCAG AGGAACCTAG ATAATAGCTG CCCATTATCG ACTCCTACAA GTATACTTTG ATAGTAATAC TTGGCACTTC CGGTACTGAT AGCGAATATC AATAGATTTC TGTTACTGAT CTTCACTCAT TTGAATCAAA TCCATTACAA ATTTGGTCAA TTGTTGCGAT CTCCTCTTTT TCAATTCCAA TTTCATCACT AATTACATTT TTTCAAAATG GCTTTAGATA CTTTGGACTT CGCCGTCATC TTGGTGCTCA CTGTGGCCAT ACTAGCGTAC ATAGTCAAAA CAAACTTCTT CTCCGAGCCA AAGAGCACTG GTTTCCTTTC GGCTGACGCT CTTGCTGGCA ACAACTTGTT GGACGTAATC AAGAAAAACA ACAAGAATGC AGTCATTTTC TATGGGTCTC AGACTGGTAC TGCTGAAGAC TATGCCTCCA AGTTGTCGAA GGAATTGTCT GCCAGATTCG GCTTGAAGAC CATGACAGTG GACTTCTCCG ATTATGACCT CACCAACTTC GACAGCATTA GCGAAGATAC TCTCTGTTTC TTCCTCATGG CTACCTACGG TGAAGGTGAA CCAACCGATA ATGCTAATGA ATTCTGTGAA TGGCTTGAAA ACGACGCTGA CACTTTGTCC ACCTTGAAGT TCACTGTCTT TGGCTTGGGT AACTCGACTT ACGAACTCTA CAATGCTGTT GGTAAGAAGC TCGACCAGCA GTTCGAAGAA AAGGGTGCTG AGAGATTTGC TGACTACGGC GAAGGTGACG ATGGTAAAGG CACTTTGGAC GAAGACTTTT TGACCTGGAA GGATAACTTG TTTGAATCGT TGAAAAACAA CTTGAACTTG GAAGAGCACG AATTGACTTA CGAGCCGGGC TTGAGATTGG AAGAAAGTGA CTTCTTGACC CTCGCCGATG ACAATGTTTC CCACGGCGAA CCTGACAAGA CCTACATTAC CGGTTCAGGT GATTTGTCCA AAGGACCTTT TGACCACTCT CACCCTTACT TATCTCCTAT CAAATACACC AAGGAATTGT TCAACTCGAA GGATAGATCT TGTGTCCATT TAGAGTTTGA CCTTTCTGGT TCCAACTTGA GGTACTCTAC TGGTGATCAT GTGGCTATCT GGCCATCCAA TTCCAACGAG AACATTCTTA CTTTTGCTAA AGCCTTTGGT TTGGAAGACA AACTTGACAC TGTGTTCGAA TTGGTAGCTT TGGATTTGAC TATTTCCATC CCTTTCCCCA CTCCTATCTC GTACGGTGCT GTTCTCAGAC ATCATTTGGA AATCACTGGT CCTGTTTCAA GACAGTTTTT GCTTTCAATT GCTGGTTTTG CTCCTGACGC TTCTTCTAAG AAGGAAGTTG CTAGAATTGG TAATGATAAG AAGGCCTTTG CAGAAGAAAT TACCCACAAG AGCTTAAACA TTGCTGATGC CTTGTTGGTT ATTTCTGACG GAAAGCCATG GTCGTCTGTT CCTTTTGAGT TCATCATTGA ATCGATTTCC CACTTGCAGC CTCGTTACTA CTCCATCTCG TCTTCTTCTT TGACGGAAAA GACTACAATT AATGTTACTG CTGTCGTTGA AGCTGAAAAG GTCGGATCTC AATTGGTCAC TGGTGTAGTC ACAAATTTGT TGAAGAATAT TGAAATTGAA CAAAATAAGA CTGGAGAAAA GCCAGTGGTT ACGTACGACT TGAGCGGCCC CAGAGGCAAG TTCTCCAAGT TCAAGCTTCC AATTCACGTC AGAAAGTCCA CCTTCAAGTT GCCTACTAAT CCTTCCACTC CCGTCATTTT GGTTGGTCCT GGTACTGGTG TGGCCCCTTT GAGAGGTTTT GTAAGAGAAA GAGTTAACCA AAAGCAAAAC GGTACGTCTG TAGGTGAAAC CGTGTTGTTC TATGGCTGCA GAAGACTGGA CGAAGATTTC TTGTACAAGG ATGAATGGCC CCAATACGCA AAGACTTTGG GATCCAGCTT TGAAATCCAC ACTGCATTCT CAAGAGAAAC TGAAAAGAAG GTCTACGTGC AACATAAGAT CTTGGAACAG TCTTCGAAGA TCAACAAATT GTTGGAAAGC GGAGCCTTTA TCTACGTCTG TGGTGATGCT TCCCGTATGG CCAGAGACGT TCAAGCTAGT TTCGCTAAGA TCTTGTCCCA AGAAAGAGGT ATCTCCGAAG AAAAGGCAGG TGATTTGCTC AGGTCATACA AGACCCAAAA CAGATATCAA GAAGATGTCT GGTAAGCTAG TAGAAATAAG AAAAGAAGAA AGCGAAATAC ATTGCTAGAG AGATTAAAGA TGCGGTTCTG TAGTATTGCT TTTGCTTCTC TGTTTGTACA TTGCAACACA GTATTATAAC TGCCAAAAGG CTACCTCTAT ATATTTATAC AATGCAATAA TATACGCTGT CCAAGGCAAT TGGTGCTAC
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Protein sequence | MALDTLDFAV ILVLTVAILA YIVKTNFFSE PKSTGFLSAD ALAGNNLLDV IKKNNKNAVI FYGSQTGTAE DYASKLSKEL SARFGLKTMT VDFSDYDLTN FDSISEDTLC FFLMATYGEG EPTDNANEFC EWLENDADTL STLKFTVFGL GNSTYELYNA VGKKLDQQFE EKGAERFADY GEGDDGKGTL DEDFLTWKDN LFESLKNNLN LEEHELTYEP GLRLEESDFL TLADDNVSHG EPDKTYITGS GDLSKGPFDH SHPYLSPIKY TKELFNSKDR SCVHLEFDLS GSNLRYSTGD HVAIWPSNSN ENILTFAKAF GLEDKLDTVF ELVALDLTIS IPFPTPISYG AVLRHHLEIT GPVSRQFLLS IAGFAPDASS KKEVARIGND KKAFAEEITH KSLNIADALL VISDGKPWSS VPFEFIIESI SHLQPRYYSI SSSSLTEKTT INVTAVVEAE KVGSQLVTGV VTNLLKNIEI EQNKTGEKPV VTYDLSGPRG KFSKFKLPIH VRKSTFKLPT NPSTPVILVG PGTGVAPLRG FVRERVNQKQ NGTSVGETVL FYGCRRSDED FLYKDEWPQY AKTLGSSFEI HTAFSRETEK KVYVQHKILE QSSKINKLLE SGAFIYVCGD ASRMARDVQA SFAKILSQER GISEEKAGDL LRSYKTQNRY QEDVW
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