Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77674 |
Symbol | |
ID | 4838769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1278295 |
End bp | 1278991 |
Gene Length | 697 bp |
Protein Length | 213 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390084 |
Product | predicted protein |
Protein accession | XP_001384542 |
Protein GI | 150865359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.528937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.410486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG TAAGAAAGAG AAAGATGAAC CGTTCATCGA TAAAGAAAGC CACCAGAAGG TTGAAAGACA GACAGAGAAA TATCAATATC CATTCCAATC CCATCATAGC AGCTAACTGG GACAAATCTT TGACATTACA ACAGAACTAT AAGCGTTTGG GATTGAGGGC CAAGCTCGGA TCTATGGCCG GAGGTCAAGA ACAGAAAGTT GAGACTTTGA CTGAGATAAG AGCCAAAAGA GAAAAAAGTG CTAGTAAAGT CAAGCCCTCA GATATTGAGC AGACCGAAGA TCCAGCCCAG ATTCCTGAGG GCGAAGCTCG TTTGATCAGA GATGAAGATA CAAATGAAGT AGTTAGGGTG ATCTATGGTA CTATGAAAGT ATCAAAAGAT AGTGAAGCCA GTGAAGTGGA AAACACTCTG GTCATAAAGC AGTTGGAAGA ATATGCTCAA AAGAACTCAC AGTTGAAGAG AGAAAGAACT GCTTCAGACA GGGAAAATGA GTGGTTGAAA AGCTTGTACG AGAAACACGG TGATGACTAC GACAAGATGA AGTGGGATAA GAAGTTGAAC GTGCAGCAAC AGAGTGCTGG TGAGTTGAGA AGAAGAATCA CAAAATGGAA AAAGGTCAAC AGTATTGAAT AGGCATATCA TATAGCATCA GACATCATTT GCATTTCCTA ATGTACACTA GTTTCAC
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Protein sequence | MTSVRKRKMN RSSIKKATRR LKDRQRNINI HSNPIIAANW DKSLTLQQNY KRLGLRAKLG SMAGGQEQKV ETLTEIRAKR EKSASKVKPS DIEQTEDPAQ IPEGEARLIR DEDTNEVVRV IYGTMKVSKD SEASEVENTS VIKQLEEYAQ KNSQLKRERT ASDRENEWLK SLYEKHGDDY DKMKWDKKLN VQQQSAGELR RRITKWKKVN SIE
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