Gene PICST_77674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77674 
Symbol 
ID4838769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1278295 
End bp1278991 
Gene Length697 bp 
Protein Length213 aa 
Translation table12 
GC content41% 
IMG OID640390084 
Productpredicted protein 
Protein accessionXP_001384542 
Protein GI150865359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.528937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.410486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCG TAAGAAAGAG AAAGATGAAC CGTTCATCGA TAAAGAAAGC CACCAGAAGG 
TTGAAAGACA GACAGAGAAA TATCAATATC CATTCCAATC CCATCATAGC AGCTAACTGG
GACAAATCTT TGACATTACA ACAGAACTAT AAGCGTTTGG GATTGAGGGC CAAGCTCGGA
TCTATGGCCG GAGGTCAAGA ACAGAAAGTT GAGACTTTGA CTGAGATAAG AGCCAAAAGA
GAAAAAAGTG CTAGTAAAGT CAAGCCCTCA GATATTGAGC AGACCGAAGA TCCAGCCCAG
ATTCCTGAGG GCGAAGCTCG TTTGATCAGA GATGAAGATA CAAATGAAGT AGTTAGGGTG
ATCTATGGTA CTATGAAAGT ATCAAAAGAT AGTGAAGCCA GTGAAGTGGA AAACACTCTG
GTCATAAAGC AGTTGGAAGA ATATGCTCAA AAGAACTCAC AGTTGAAGAG AGAAAGAACT
GCTTCAGACA GGGAAAATGA GTGGTTGAAA AGCTTGTACG AGAAACACGG TGATGACTAC
GACAAGATGA AGTGGGATAA GAAGTTGAAC GTGCAGCAAC AGAGTGCTGG TGAGTTGAGA
AGAAGAATCA CAAAATGGAA AAAGGTCAAC AGTATTGAAT AGGCATATCA TATAGCATCA
GACATCATTT GCATTTCCTA ATGTACACTA GTTTCAC
 
Protein sequence
MTSVRKRKMN RSSIKKATRR LKDRQRNINI HSNPIIAANW DKSLTLQQNY KRLGLRAKLG 
SMAGGQEQKV ETLTEIRAKR EKSASKVKPS DIEQTEDPAQ IPEGEARLIR DEDTNEVVRV
IYGTMKVSKD SEASEVENTS VIKQLEEYAQ KNSQLKRERT ASDRENEWLK SLYEKHGDDY
DKMKWDKKLN VQQQSAGELR RRITKWKKVN SIE