Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77600 |
Symbol | |
ID | 4839012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 222654 |
End bp | 223878 |
Gene Length | 1225 bp |
Protein Length | 364 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390327 |
Product | predicted protein |
Protein accession | XP_001384002 |
Protein GI | 150864970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.884795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTTTTTTCAA AAAAAAAGGA GGACCATTTT GCATCCACTT GAATTGTCAT AGACTGATTT ATGTCACAAG TTTTCACTAC TTCAACGATA CCGTTGAGCT TTGGTCCCCA GCATGAGCCG GGGCCGAAAC ACAAACTTCC GGCGGCTGCT GCTCCAGATA AATCGCCAGA AAACGAGCCA GTGGCCGAGC TGGCGCTGCC GATCTGGAAT TGTATGTTGG CTGGAGGATT TGGTGGAATG GTAGGAGACA CTTCCATGCA TTCTTTGGAT ACCGTAAAAA CTAGGCAACA GGGATATCCT CATAATCCCA AGTATAAACA TATGGTACCG GCCTACCGGA CGATATTGAA GGAGGAAGGC TTCTTCCGGG GATTGTACGG AGGCTATACG CCTGCAATTC TAGGCTCGTT TCCGTCTACA GCAGCATTTT TTGCAACATA CGAGTACACC AAGCGTAGAC TTATCAACGA GTACGGTATC AACGAGACGA TGTCGTACTT CGTTGCGGGA GTTCTTGGGG ATTTAGCGTC GTCGATTTTC TACGTTCCCT CAGAAGTCTT GAAGACCCGG TTGCAACTAC AGGGAAAGTT CAATAATCCG TTCACGAAAG AATGCGGCTA CAACTACAAG GGCTTGATCA ATGCTGTCTC GTCGATTGCT AAGAAAGAGG GACCATCTAC TTTTGTGTTT GGCTACAAAG AGACGTTGTT TCGGGACTTA CCTTTTTCTG CCCTACAATT TGCATTCTAC GAGAAGTTCA GACAGCTTGC CATATTCTAC AACAAGTCGC CGGACTTACC AGTTTCGCTT GAGCTTTTGA CTGGGGCTGC TGCCGGGGGG TTGGCTGGAA CCTTGACGAC GCCGTTGGAC GTGATCAAGA CGAGAATTCA AACTGCAACC AACACTGCAG AATTGTCTGA GTTCTCGTCC ATCAAGACAT CAAATCCGGT TGTCAAATTC GTGTCGAAAT CATCGACGTT AAACGCGTTA GCATCCATCT ACAAACACGA CGGTATAATA GGAGCGTTTT CCGGTGTCGG ACCTCGTTTT ATCTGGACCG GAATTCAGAG TTCCATCATG TTATTGTTGT ACCAGGTATC GTTGAAACAG CTAGACCAGA TTCTCGGTAA CAACGAGGCT GTCATGGACG CATAGTCCCT TGCATTGTAT ACTAGAATGA TGTCATGTAA ATAGAGATAG ACATAACTAA TATAGGCTGA TAGAG
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Protein sequence | MSQVFTTSTI PLSFGPQHEP GPKHKLPAAA APDKSPENEP VAESASPIWN CMLAGGFGGM VGDTSMHSLD TVKTRQQGYP HNPKYKHMVP AYRTILKEEG FFRGLYGGYT PAILGSFPST AAFFATYEYT KRRLINEYGI NETMSYFVAG VLGDLASSIF YVPSEVLKTR LQLQGKFNNP FTKECGYNYK GLINAVSSIA KKEGPSTFVF GYKETLFRDL PFSALQFAFY EKFRQLAIFY NKSPDLPVSL ELLTGAAAGG LAGTLTTPLD VIKTRIQTAT NTAELSEFSS IKTSNPVVKF VSKSSTLNAL ASIYKHDGII GAFSGVGPRF IWTGIQSSIM LLLYQVSLKQ LDQILGNNEA VMDA
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