Gene PICST_77556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77556 
SymbolANP1 
ID4838711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1312128 
End bp1314586 
Gene Length2459 bp 
Protein Length459 aa 
Translation table12 
GC content44% 
IMG OID640390026 
ProductMannan polymerase II complex ANP1 subunit (M-Pol II subunit ANP1) (Aminonitrophenyl propanediol resistance protein) 
Protein accessionXP_001384550 
Protein GI150865364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.987813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000324518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTTAGATTTG ACTTTCACTA GACGCTTAGT TGGAGGTAGT TTTTATTGCT TAAGGCACTC 
GGATCGTATT CCCCATAGTT GAGATTTCTC CGTCTCTTCG CTCGCATCTT TGTCATTGGG
ACTGTATTGG AACAGGTATT GGAACTGGCG CTGTTTCTTT CATAAACAAT CGTAGGAGAC
ACTATAAGGT TATAGACTCC ATTGGTTTCA ATTGGTTTCA TTCAACAATT GCTACTATCT
GAATCCACTG GATCTCTGTA TTTCGTCAAG AAATCGTAGT TCTTCAACTA AACATCCTCA
TCAAGGACTA ATCCACAAGA CTCACAGCCC CTAGACTACA CATTTCATTT CTGTTGAAAT
CTGTTCAGTT ATCTCAATAT TGTATCTTTT CAATATCATA CTGTTCGACT TCATAACTGC
AATCGCTACT ATCATCGCCA GCATCCGATA TACCTCGCTT TTGTAGCTAC TTCCAGTTAT
ACTTCATCAT TCATCATATT CAATATCTAC GTGTTATTTC GTGATAGAGA CAACATTCCA
TATTGAACCA CGTATTGAAA TACTATTTTC ATTTATTCAT CAAATCATTG CCTTCTTCTA
GAAGATTCTG ATATCAAGCT TTCAAGTTTT CAAGCTTTCA GATTGGGAAG TTCCGAAAGT
CTTGAGAGTC TCATTCTAAT TACTATACGT TTTACTATAT GTCGTTCTCG ATGTCTCAGA
TTTTGAGCCC CTACGACTAC AAAGACCACG GCAAAGAGTC GCTAAATAAG AAGGCGATAA
TTTCGTCGGT TAAGACGGCG CTTAAATCGA AGATCCTCTA CGGTGTCGTG GCCATCATTG
TCTTAGTCGC TTTCGTCAAG GCCCAAATTT CTGCATTCTC ATCACCAGTC TACACACCCA
ATTTCTCGAA AATACCTACA GTTCAGTATT TTGACTTGGA TCACTATGAC GGACTGGCAA
ACGGCTGGCA GCACGAAGAG CGGGTGTTGT TCTGTGTACC GTTGAGAGAC GCTGCTCCCC
ATTTGCCCAT GTTCTTTGGC CACATGAAGA ATCTCACATA CCCTCATAAT CTTATAGATC
TAGCATTTCT CGTGTCAGAT TCTTCGGACG ACACTATGGG CGAGTTGCAG AAGCATCTCA
AGGAGGTCCA GACCGATCCG GACACTTCCA AAAGATTTGG TGAAATCGAG ATCTTTGAAA
AGGACTTCGG CCAAGTTATA GGTCAAGGCT TCTCCGATAG ACATGGTTTT GCCGCCCAAG
GTCCCAGACG TAAATTGATG GCTAGAGCTA GAAACTGGCT CTGGACTGTC GCAATTAAAC
CCTACCATTC TCATGTCTAC TGGCGTGACG CTGACGTCGA AACAGTGCCC CCTACTATTC
TAGAAGACTT GATGCACCAC GACAAAGACG TAATAGTGCC CAATGTATGG AGACCGTTGC
CTGACTGGTT GGGCAACCAG CAGCCATATG ACTTGAACTC GTGGCAGGAG TCAGACGGAG
GGCTTCTGTT GGCAGAAACG TTGGATGAAG ACGCTTGTAT TGTAGAAGGC TATGTAGAGT
ACCAAACCTG GAGACCACAT TTGGCCTACT TACGTGACCC CTATGGAGAC CCAGAGGTAG
AGATGGAATT GGACGGGATT GGAGGTGTTT CCATCTTGAC CAAGGCCAAG GTTTTCCGTA
CCGGAGCTCA TTTCCCAGCG TTTTCATTCG AGAAACATGC CGAAACGGAA GCCTTTGGCA
AGTTAAGTAA GAGAATGGGC TATTCGGTGA TCGGATTACC GCACTATGTG ATCTGGCATA
TCTACGAGCC TTCCTCTGAC GACTTGAAGC ACATGGAATG GATGGCCCTG GAAGAAATCC
GACAGAAGGA AGAGGCCAAG ATTAAGAAGG TCTACGACAA AGTATGGAAC AAGGCGTTTG
AAGATGTCCA AGATGTCTGG AGACTGGAGA AGAATATGTT CCTCAAGAAC ACAGACATGT
CCAACGTTAG ACGTATCCAA GTAGACTGGT CAGGTGTAGA TGACAATCTC GATAAACAGT
CCAATGACAA GAAGTTGGCT GATTTCTCAC CAGAGTGATC GATCGTATAG AAACAGAACT
TGAACTCTTC CGAGACCAGC ATAAACTCTA CAGTATAAAC TTCTCACACG CAAAGGGTAC
TCTTTAGCAC AGGTAACAGT AAAAAGTTAG TACAGGCATA AGAAAACTTC AAGCTACATA
AAAATCAGTA AACCTTCGGT AACTACTACA GTAATCCAGA ACCAGCACCC AGCACCAGCA
CCTAATCAAA AGCTGGATCA GATCCACTGG ATTCCAGTCA TACAGCCCGA TGGCGCCTCA
CTTTTGACGT GGCAGCCGAA TCAGCAGCTA CTTATTCCAC GCAGCGAAAT CATATGACAT
CACTGCTTCT ACCTCTTGTG TATTATACTT GTGTAATAAT AAACCAGCTC GTAACCTAG
 
Protein sequence
MSFSMSQILS PYDYKDHGKE SLNKKAIISS VKTALKSKIL YGVVAIIVLV AFVKAQISAF 
SSPVYTPNFS KIPTVQYFDL DHYDGSANGW QHEERVLFCV PLRDAAPHLP MFFGHMKNLT
YPHNLIDLAF LVSDSSDDTM GELQKHLKEV QTDPDTSKRF GEIEIFEKDF GQVIGQGFSD
RHGFAAQGPR RKLMARARNW LWTVAIKPYH SHVYWRDADV ETVPPTILED LMHHDKDVIV
PNVWRPLPDW LGNQQPYDLN SWQESDGGLS LAETLDEDAC IVEGYVEYQT WRPHLAYLRD
PYGDPEVEME LDGIGGVSIL TKAKVFRTGA HFPAFSFEKH AETEAFGKLS KRMGYSVIGL
PHYVIWHIYE PSSDDLKHME WMASEEIRQK EEAKIKKVYD KVWNKAFEDV QDVWRSEKNM
FLKNTDMSNV RRIQVDWSGV DDNLDKQSND KKLADFSPE