| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77514 |
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| Symbol | TEF3 |
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| ID | 4838759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 958067 |
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| End bp | 959537 |
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| Gene Length | 1471 bp |
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| Protein Length | 458 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390074 |
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| Product | translational elongation factor EF-1 alpha |
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| Protein accession | XP_001384491 |
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| Protein GI | 126135934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0163736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATCAAAATGG GTAAGGAAAA GACTCACGTT AACGTCGTTG TTATTGGTCA CGTCGACTCT
GGTAAGTCCA CCACCACCGG ACACTTGATC TTCAAGTGTG GTGGTATCGA CAAGAGAACC
ATTGAAAAGT TCGAAAAGGA AGCCGCTGAA TTGGGTAAGG GTTCTTTCAA GTACGCTTGG
GTTTTGGACA AACTTAAGGC TGAAAGAGAA AGAGGTATCA CCATCGATAT CGCTTTGTGG
AAGTTCGAAA CTCCAAAGTA CCACGTCACC GTCATTGATG CTCCAGGTCA CAGAGATTTC
ATCAAGAACA TGATCACTGG TACTTCCCAA GCTGACTGTG CTATTTTGAT TATCGCTGGT
GGTACCGGTG AATTCGAAGC TGGTATCTCC AAGGACGGTC AAACCAGAGA ACACGCTTTG
CTTGCCTACA CCTTGGGTGT TAAGCAATTG ATTGTTGCTG TCAACAAGAT GGACTCCGTC
AAGTGGGACA AGAACAGATT CGAAGAAATC GTCAAGGAAA CCTCTAACTT CGTCAAGAAG
GTCGGTTACA ACCCAAAGAC TGTTCCATTC GTCCCAATCT CTGGTTGGAA CGGTGACAAC
ATGATTGAAC CATCTCCAAA CTGCCCATGG TACAAGGGTT GGGAAAAGGA AACCAAGGCC
GGTAAGTCCT CTGGTAAGAC CTTGTTGGAA GCCATTGACG CTATCGAACC ACCTTCGAGA
CCAACCGACA AGCCATTGAG ATTGCCATTG CAAGATGTTT ACAAGATCGG TGGTATTGGT
ACGGTGCCAG TCGGTAGAGT TGAAACCGGT ATCATCAAGG CCGGTATGGT TGTCACCTTT
GCCCCAGCTG GTGTCACCAC TGAAGTCAAG TCCGTCGAAA TGCACCACGA ACAATTGACT
GAAGGTGTCC CAGGTGACAA CGTTGGTTTC AACGTCAAGA ACGTTTCCGT CAAGGAAATC
AGAAGAGGTA ACGTCTGTGG TGACTCCAAG AACGACCCAC CAAAGGCTGC TGAATCTTTC
AACGCTCAAG TTATCGTCTT GAACCACCCA GGTCAAATCT CCTCTGGTTA CTCTCCAGTC
TTGGATTGTC ACACTGCCCA CATTGCTTGT AAGTTCGACA CCTTGATTGA AAAGATCGAC
AGAAGAACTG GTAAGAAGTT GGAAGAAAAC CCTAAGTTCG TCAAGTCCGG TGATGCTGCT
ATCGTCAAGA TGGTCCCAAC CAAGCCAATG TGTGTTGAAG CCTTCACTGA CTACCCACCT
TTAGGTAGAT TCGCCGTCAG AGACATGAGA CAAACCGTTG CCGTCGGTGT CATCAAGTCT
GTTGAAAAGT CTGACAAGGC TGGTAAGGTT ACCAAGGCTG CTGTCAAGGC TGGTAAGAAG
TAAACTGACT GAATAGACTG AAAATTAATA TTTATGTTTA TTATTGTATA GTTTATTGAT
GAATATAGTT CTTTGAAGTA TATGTCTTTG T
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| Protein sequence | MGKEKTHVNV VVIGHVDSGK STTTGHLIFK CGGIDKRTIE KFEKEAAELG KGSFKYAWVL
DKLKAERERG ITIDIALWKF ETPKYHVTVI DAPGHRDFIK NMITGTSQAD CAILIIAGGT
GEFEAGISKD GQTREHALLA YTLGVKQLIV AVNKMDSVKW DKNRFEEIVK ETSNFVKKVG
YNPKTVPFVP ISGWNGDNMI EPSPNCPWYK GWEKETKAGK SSGKTLLEAI DAIEPPSRPT
DKPLRLPLQD VYKIGGIGTV PVGRVETGII KAGMVVTFAP AGVTTEVKSV EMHHEQLTEG
VPGDNVGFNV KNVSVKEIRR GNVCGDSKND PPKAAESFNA QVIVLNHPGQ ISSGYSPVLD
CHTAHIACKF DTLIEKIDRR TGKKLEENPK FVKSGDAAIV KMVPTKPMCV EAFTDYPPLG
RFAVRDMRQT VAVGVIKSVE KSDKAGKVTK AAVKAGKK
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