| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77457 |
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| Symbol | CTK1 |
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| ID | 4838787 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1635932 |
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| End bp | 1638326 |
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| Gene Length | 2395 bp |
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| Protein Length | 590 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390102 |
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| Product | kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit |
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| Protein accession | XP_001384266 |
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| Protein GI | 150865162 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGAACAGTTT TACATTCTCT GGTCTTGTTT TGATAGTTCA ATCTTGAACA AGTTTGCAAA
CATATAACAC AGGTTTTGAA GAGTCAGACA GAATTTCAGA ATTTTCCAGA TAAATCTAGA
TCTTTTACTA AAACAATCTT GAAATACTCT CTTGCCATTC ACAATGTCTG ACAGATACAG
GCCTCCACCA GCTGGACCAC GGTCGAGCAG AGACTTTCAG AGGAAGCCAT CATTTAAGAG
CAGAGAGAGA AATAGGGATA GGGATAGAGA CAGGGACAGA GATAATAGAG AAAGAGACGT
ATACAAGCCG GGAGGATCAC GTAGACATCC AGAAGATAGA GAAATAGAAA GACCAAGAGA
CAGAGGCAGA GATAGACCCC CAGGAAGAGA TTATCAAGAA AGAAACAGAG AAAGAGAGAG
AGATTATCCA GAAAGAGACA GAGACAGAGA AAAAGACTAT CCAGAAAGAG ACAGAGAAAG
AGATATGTAT AGACCTCGCA ACGACACGTA TACACCTAAA AAAGGACCAG GTGGTGGACG
TAAAGATTAT CTAAAGGATA AACCTAATGA TAGCCATCCT AGAGGTACCT ACCCAAGAGA
TACTCATCCT AAAGAAAATT ATCCTCGAGA TACTAATAAT GATAATTACG CTAATGAGAC
TTATTTTAAA GATAAATCGA AGGATAATCA TTCTAATGAA AATCATGTTA ATAATACTCA
CGATAAAGAT AGTTATGTTA AAGATATTCA TCCAGAAGAT AATCATAAGG ATGTTCACAA
AGATACTCCT AATGATACAC ATAAAGATGA GCCTTCTTTA GGATCCAAAA GGGGACCTCC
TTCTGGACCC AGTAGTTATC GGAAGAGAAG AGAATTAGCG AAAGAAAAGG AGAAAAAAAT
TGAACCATTT AGAGGGATAC CTTCTGGTAG AGGATCTTCG AAGGGCCAAC CTCCTGGAAG
AGGTGTTCCA GGTAGAGGGC CACCTTTAGG ACCTCGTGGA GGCAAGAAAG CAGGTGCCAC
TAATCAACAA CAACAACAAC AACCAAAGCC TCCTAAGCAG AAACCTCAAA AGCTCTCCAA
GTCTCAGATA TATTCGATCT ATGTTCCTGG TGGATCGCGT GTTTACCAAA GAACACAGCA
AGTAGGCGAG GGAACATACG GTAAAGTCTA TAAAGCTAAG AATACCAAGA CAAATGAGTT
TGTTGCCTTG AAGAAGTTGC GGTTGGAGTC TGAACGAGAG GGCTTTCCAA TTACGGCCAT
GAGAGAAATC AAGCTTTTGC AATCGTTTGA CCATCCGAAC ATTGTGGGCT TGTTGGAGAT
GATGGTCGAA CAGAATCAGA TCTATATGAT CTTTGACTAC ATGGACCATG ACTTGACAGG
ATTTTTGTCC CATCCAGATT TGGTTCTTGA GGAGGGCCAT TGCAAGTATA TCTTCCAGCA
GTTGATGGAA GGGTTAAACT ATTTACATAA GAAGAGAGTC ATTCACCGTG ACATCAAGGG
TTCCAACATT TTGTTGGACA GTACCGGCTG TTTGAAGATT GCTGACTTCG GCTTGGCCAG
AACGATGAAG ATTGTGAATG ACGGTGAGAG TCCCGATTAC ACCAACAGAG TGATCACCAT
CTGGTATAGA CCTCCCGAGT TGCTTTTGGG AGCCACTGAC TATGGCAGAG AGGTCGATAT
CTGGGGTGTG GGGTGTCTTT TGATTGAGCT TTATACGAAG GTAGCTGCTT TCCAGGGCTT
TGATGAAGTT GGTCAGCTTT GCCGTATTTT CAATGTCATG GGGACTCCTT CTATTGTAGA
CTGGCCCGAC ATTCAGAATT TGCCTTGGTT TGAAATGCTC AAACCAAAAG TTAACGTCGC
TTCCAAATTC AAAGCCAAGT ATGAATCTGC CATGTCTCCT GATGGTTTTG ATTTGGCATT
GAATTTGCTT CGTTTGAACC CCAAAGCCAG GTTCACAGCC GAACAAGCTT TACAGCACAG
GTATTTTACC GAAGAGCCGT TCCCACTTCC ATTGACTTTC TTGAAAGATG TAGAAGGTGA
ATGGCACGAG TTTGAAACCA AAAAGAGAAG AAGGAAGGAA CGTAAGAGAC TCCAGGACGA
GGCTAAAGCA AAACAGAATA AGGACAAACA ACTGCAGGGC ACCGTTGATG TCGATGCATC
TCTTCCTGTA AAATCTGTTC TGGAAGTTCC ACTAGATATT CCTCAATCCA GTACCGTCAA
CACTGTAGAT GTTGGAACAG TTGAGTCCAA TATTGACTCA GATATTGAGA TCGATGCAGT
AGCCACTGAT GATAAAATCA GTGAAGAAGC TAAACATCCA AAAGGCCAAG AAAGTGATGG
TTATGAACCA TAGTATATGT ATGATGGAAG TATCAAAGTA ATTGAATAAT TCACT
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| Protein sequence | MSDRYRPPPA GPRSSRDFQR KPSFKSRERN RDRDRDRDRD NRERDVYKPG GSQRDRERDM
YRPRNDTYTP KKGPDNHKDV HKDTPNDTHK DEPSLGSKRG PPSGPSSYRK RRELAKEKEK
KIEPFRGIPS GRGPPLGPRG GKKAGATNQQ QQQQPKPPKQ KPQKLSKSQI YSIYVPGGSR
VYQRTQQVGE GTYGKVYKAK NTKTNEFVAL KKLRLESERE GFPITAMREI KLLQSFDHPN
IVGLLEMMVE QNQIYMIFDY MDHDLTGFLS HPDLVLEEGH CKYIFQQLME GLNYLHKKRV
IHRDIKGSNI LLDSTGCLKI ADFGLARTMK IVNDGESPDY TNRVITIWYR PPELLLGATD
YGREVDIWGV GCLLIELYTK VAAFQGFDEV GQLCRIFNVM GTPSIVDWPD IQNLPWFEML
KPKVNVASKF KAKYESAMSP DGFDLALNLL RLNPKARFTA EQALQHRYFT EEPFPLPLTF
LKDVEGEWHE FETKKRRRKE RKRLQDEAKA KQNKDKQSQG TVDVDASLPV KSVSEVPLDI
PQSSTVNTVD VGTVESNIDS DIEIDAVATD DKISEEAKHP KGQESDGYEP
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