Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77434 |
Symbol | NNT1 |
ID | 4838981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 352136 |
End bp | 354218 |
Gene Length | 2083 bp |
Protein Length | 594 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390296 |
Product | concentrative Na+-nucleoside cotransporte |
Protein accession | XP_001384367 |
Protein GI | 126135686 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.443393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCTTTTGTTA ATACTTGGTA TTCCCATGTC CTACTACTTG TTGACTCACG GATACAAATC ATACCTCCAG GCCGTTCATT AACCGGAACG CTAATTTATC CGTTCCAAAA AATACTGTAT TAAACTTTTT CGCAATGTCT AACAATATTG CACCCGTCAA ATCGACGACC AACTCAATTG CTCAGTATGA TCAAAATGAT CTCAGCAAAG ACCTTGAAAG CAACAAGGAA AAGGAAGTGT CTTCTGATGA AATGCAGGAG TCCAAAGAAA TCTCGGACTC GGACTCTCAA AAGGATGCTC CTTCTTCTAG CCTTATTCAC AAGTTGAAAA ATAAGTTCCC CTACTACAGG TTGGCCATCC ACATCTTCCT TGGCTGTTTT TTTACCTCAT GGTGGTTGTC CATAATCATT CAGGACAAGC ACAGAAGTAA GTGGTTGATT CCTACCGTTT TTTGGGGTAT GGCCATGGTT AGATTGATCT CATGGCATTG CAACATCTTG CCTTATTTGT TGAGTAAGGT GAAGTTGGTT TGGGACTATT TCACTGACAT CATCTACACA AAGATCTTTA CTCAAAGATG GCAACGATTG ATTGCAGGTA CTGTTGTCAC CGTTGGTTCC ATTTTGCTTG GTACTTTTGT TCCTTCGGAA ACCGAATACT CCAAGAGAGA AGACCGTGCA ATTTCTTTCT TTGGCTGTAT TGTCGCCGTT TTCCTCTTGT ACGTTACCTC CAGAAACCGT TCTGCTATCC AATGGAACAC TGTTATTGGT GGTATGTTGA TGCAATTCAT CGTCGCCATC TTTGTGTTGA GAACCAAATG TGGTTACGAT GTGTTCAACT TCATCTCAAC TTTAGCCCGT GAATTGTTAG GTTTCGCCAA GGATGGTGTT GCTTTCTTAA CTAATGCCAA TATCTCTAAC TTGGGTATGT TTTTCTTCAC AGTTTTACCA TCAGTTGCTT TCTTCGTTTC CTTTGTGCAC ATATGGTACT ACTTTGGAGT CATTCAATGG GCTATCGGTA AGTTTGCTTA CTTCTTCTTC TGGACCTTGA GAGTGTCTGG TGCTGAAGCC ATTACTGCCG CTGCTTCTCC TTTCATTGGA ATTGGTGAGT CCGCTATCTT GGTTAAGGAC TTGATGCCAT ATTTGACCAA AGCTGAATTG CACCAGATCA TGACCTCTGG TTTCTCGACT ATCTCCGGTG CTGTATTGGT TGGATATATT GGTTTGGGTT TGAACCCTCA AGCCTTGGTG TCTTCATGTG TCATGTCTAT TCCAGCCTCT TTAGCTGTGT CGAAGTTGAG ATACCCAGAA ACCGAAGAAC CAATTTCGAG AGGAAGAGTT ATTTTCCCAA AGAATGAAAG CGTTGAAAAG CCTCAAAACG TCTTGCAAGC TTTCTCCGAA GGAGCCACTT TGGGTTTGAG AATCGCTGGT ACAATGTTGA TCCAGTGTTT GTGTATCATT GGGCTTGTTT CATTAATCAA CGGTGTCTTG ACTTGGTTCG GAAACTTCTG GAACATCGAC CACTTGTCGT TGCAATTGAT TCTTTCCTAC ATCATGTACC CAGTGTCGTT CTTGTTGGGT GTTCCACGTA ATGAAATCAT GCACGTTGCC AAATTACTTT CCCACAAGTT CATCGAAAAT GAATTTGTTG CTTATAACAT GTTGATGACC GAGGCTCCAT ACAACGAAAT GTCCAGAAGA GGTACTTTAA TTGCTACTTA CGCTTGTTGT GGCTTTGCCA ACTTTGGTTC CGTAGGTATT ACTTTGGGTG TCTTAAACAC TTTGTCCAAC AATTCCAGAG CCAAGGACAT TTCAGCCTCT ATCATGTCAG CCTTGGTCTG TGGTGCCATC GCTACCACAT TGTCTGCTGC TCTTGCAGGT ATGGTCATGC ACGATTTGAA TCAGTTCCAC TTGAATTGAA GCTCGGGCTA ACATTCTGGC CTTGTTTGGT TGATTCATGT GTGCACATCT AGATTCAATT GTGTCCTGTC ATAATTGTTT CATGTCGGCC AAGTTTGGTT TAAAATTTGT GAATCTTCTT CGTTAGAGTT TGCTTATCCT AATAGATACT AATTACTTCG TAC
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Protein sequence | MSNNIAPVKS TTNSIAQYDQ NDLSKDLESN KEKEVSSDEM QESKEISDSD SQKDAPSSSL IHKLKNKFPY YRLAIHIFLG CFFTSWWLSI IIQDKHRSKW LIPTVFWGMA MVRLISWHCN ILPYLLSKVK LVWDYFTDII YTKIFTQRWQ RLIAGTVVTV GSILLGTFVP SETEYSKRED RAISFFGCIV AVFLLYVTSR NRSAIQWNTV IGGMLMQFIV AIFVLRTKCG YDVFNFISTL ARELLGFAKD GVAFLTNANI SNLGMFFFTV LPSVAFFVSF VHIWYYFGVI QWAIGKFAYF FFWTLRVSGA EAITAAASPF IGIGESAILV KDLMPYLTKA ELHQIMTSGF STISGAVLVG YIGLGLNPQA LVSSCVMSIP ASLAVSKLRY PETEEPISRG RVIFPKNESV EKPQNVLQAF SEGATLGLRI AGTMLIQCLC IIGLVSLING VLTWFGNFWN IDHLSLQLIL SYIMYPVSFL LGVPRNEIMH VAKLLSHKFI ENEFVAYNML MTEAPYNEMS RRGTLIATYA CCGFANFGSV GITLGVLNTL SNNSRAKDIS ASIMSALVCG AIATTLSAAL AGMVMHDLNQ FHLN
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