Gene PICST_77382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77382 
SymbolERG7 
ID4838454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp762145 
End bp764650 
Gene Length2506 bp 
Protein Length728 aa 
Translation table12 
GC content44% 
IMG OID640389769 
ProductLanosterol synthase (Oxidosqualene--lanosterol cyclase) (2,3-epoxysqualene--lanosterol cyclase) (OSC) 
Protein accessionXP_001384446 
Protein GI150865294 
COG category[I] Lipid transport and metabolism 
COG ID[COG1657] Squalene cyclase 
TIGRFAM ID[TIGR01787] squalene/oxidosqualene cyclases 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTATT CCGATAAACT TGGGATTCCT AAAACAGACC CTTCACTATG GAGACTTCGT 
ACGACCGAAC TAGGACGTGA AACATGGCAC TACTTGACCC CGCAAGAAGC AGAGCATGAG
CCTCAGACCT CATATGTCAA GTACCTTTTA CAGACTAAAG ACTTTCAAGC CCCTGCTGAA
GAGAAGATCA CGTCTCCCTT CCATGCCGCA GAGAAAGGCG CGCAATTCTT AGAATTACTC
CAAGACGAAT CGGGAATATT TCCTTGCCAA TACAAGGGAC CTATGTTTAT GACCATTGGC
TACGTAGTTG CAAACTATTA TAGTGGAAAC GAAATCCCCG AGCCTTATCG TCATGAGATG
ATCCGTTACA TCGTGAATTC TGCCCATCCT GTTGACGGCG GATGGGGATT GCATTCCATA
GATAAATCTA CTTGTTTTGG AACTGCCATT AACTATATAG TGTTGCGCCT ATTGGGATTA
GAGGCAGACC ACCCGGTTTG CGCTAAAGCA CGCAAAACTT TGCACAGTTT AGGTGGAGCA
ATCAAGGTGC CTCATTGGGG AAAAGCCTGG TTGTCTATTT TAAGTTTGTA CGAGTGGGAG
GGAGTGAACC CTGCCCCACC AGAACTCTGG GCATTGCCAT ACCTGTTACC CATCCATCCA
GGTAGATGGT GGGTCCATAC TCGAGCTATA TACCTACCCT TAGGATTCGT TCTGTCCAAT
AGGATCCATT GTAAATTGGA CCCGTTATTG GAACAATTGC GTACTGAAAT CTACTTGCCT
CGTCAGTTGC CGTACACTTC TATTGATTTC TCCCAACACA GAAACGATGT CTGTGGAATC
GATTTGTACT ATCCGCATAC TAAGGTATTG AACATGGCCA ACTACGTCTT GAGTAAATAC
GAAGGTTGGA GGCCTAAGTG GGTATTGGAC TGGATCAATA AGAGAGCCTA CGACTTGATT
CTCAAAGAGT ACCACAACAC AGAGTATTTG TGTATTGCGC CTGTAAACTT TGCTTTCAAC
ATGGTAGTAA CCCATTTCTA TGAAGGTCCC AAGTCAGAAA ACTTCGCCAA ACTACAAGCC
AGAATGAACG ATGTCTTGTT CCACGGCCCT CAGGGTATGA CTGTAATGGG AACCAATGGT
GTTCAGGTCT GGGATGCTGC GTTCATGGTT CAATATTTCT TTATGGCTGG TTTGGCCGAC
CTTCCACGGT ACCACGACAT GATCCGTAAG AGTTATATGT TCTTGGTGAG ATCACAGTTT
ACAGAAGATT GCGTTGATGG CAGTTTTAGA GACAAACGGA AAGGTGCATG GCCCTTCAGT
ACCAAAGAAC AAGGATACAC TGTTAGTGAT TGTACTGCCG AAGCACTTAA GGCTATCATT
ATGGTGAGAA ACCATCCAGC TTTCGCTGAT CTTGTGGATG AGATCAAAGA AGAGGACCTC
TTCAACGCGG TGGATGTTCT CTTGAATATC CAAAACGTTG GAAACTTCGA GTTTGGTTCG
TTTTCCGCCT ATGAAAAGAT CAGATCCACC TTGTTGCTCG AGAAACTCAA TCCTGCTGAA
GTATTCAATA ACATCATGGT GGAGTATCCC TATGTTGAAT GTACCGATTC GTCAGTGTTG
GGATTAACAT TCTTCGCCAA ATATTATCCT AATCATAAAC CTGAGGTAAT CAGCACTGCC
ATTGAAAGAG CTATCAAGTA CATCATCAGT GCACAGGACG AAATTGACGG ATCATGGTAC
GGTGCCTGGG GCATTTGTTA CACTTATGCT TCGATGTTTG CTTTAGAAGC TTTAAACACC
GTAGGGCTCA ACTACGAGAA TTCGGCTACA GTGAAGAGAG GTTGCGACTT CTTGATCTCA
AAACAGCTTC CAGATGGTGG CTGGTCCGAA TCGATGAAAG CCTGCGAGAC ACATTCGTAT
GTCAATGGTG ACAAGTCCTA CGTAGTACAA ACGGCCTGGG CCGTGATCGG CTTGATCTTG
GGTGGGTATC CCGACCAGGA ACCAATCAGA AAAGGTATCC AGCTTTTGAT GCAAAGACAG
TTGCCTACCG GAGAGTGGAA GTTTGAAGAA GTCGAAGGTG TTTTCAACCA CAGCTGTGCC
ATTGAGTATC CGTCATACAA GTTCCTCTTT CCGATCAAGG CTCTTGGTTT GTACCACCAA
AAATTTGGAA ACGAGCCAAT TGTATAAAAT GTAGTTTTGT GACGCGAGTT GTCATATTGT
TTCCTAAATG GTACCAAGCT GGTTGGTGTT ATTGTTGGAT GCGAGCCGCT TGGGTAGCAA
GGCATCTCAT GCATGTTTCA TCATGTCAAG AAAACACAAA GACAAAAAAT GGTTACATTC
ACACATTTAA TTTATTTGCT GCTACTGTTG CTACGTCCGA GTCGGTTCAT TAAAATAGTA
ATTGTATTAT GAATATTATG AACATTAACT AAAGATTAAT CATGTCGCAA AAAGCAAGCA
GTGGTAAAAA AATGTGATGA TGATGATGAT GATGATAATT AAAAGT
 
Protein sequence
MYYSDKLGIP KTDPSLWRLR TTELGRETWH YLTPQEAEHE PQTSYVKYLL QTKDFQAPAE 
EKITSPFHAA EKGAQFLELL QDESGIFPCQ YKGPMFMTIG YVVANYYSGN EIPEPYRHEM
IRYIVNSAHP VDGGWGLHSI DKSTCFGTAI NYIVLRLLGL EADHPVCAKA RKTLHSLGGA
IKVPHWGKAW LSILSLYEWE GVNPAPPELW ALPYSLPIHP GRWWVHTRAI YLPLGFVSSN
RIHCKLDPLL EQLRTEIYLP RQLPYTSIDF SQHRNDVCGI DLYYPHTKVL NMANYVLSKY
EGWRPKWVLD WINKRAYDLI LKEYHNTEYL CIAPVNFAFN MVVTHFYEGP KSENFAKLQA
RMNDVLFHGP QGMTVMGTNG VQVWDAAFMV QYFFMAGLAD LPRYHDMIRK SYMFLVRSQF
TEDCVDGSFR DKRKGAWPFS TKEQGYTVSD CTAEALKAII MVRNHPAFAD LVDEIKEEDL
FNAVDVLLNI QNVGNFEFGS FSAYEKIRST LLLEKLNPAE VFNNIMVEYP YVECTDSSVL
GLTFFAKYYP NHKPEVISTA IERAIKYIIS AQDEIDGSWY GAWGICYTYA SMFALEALNT
VGLNYENSAT VKRGCDFLIS KQLPDGGWSE SMKACETHSY VNGDKSYVVQ TAWAVIGLIL
GGYPDQEPIR KGIQLLMQRQ LPTGEWKFEE VEGVFNHSCA IEYPSYKFLF PIKALGLYHQ
KFGNEPIV