Gene PICST_72128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_72128 
Symbol 
ID4838931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1143414 
End bp1144568 
Gene Length1155 bp 
Protein Length336 aa 
Translation table12 
GC content40% 
IMG OID640390246 
Productpredicted protein 
Protein accessionXP_001384518 
Protein GI150865342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTCAGTGAA ACAGGACTAC AAAAACTTAG CCGAAAGATT GATCTCTATC TATGCTCTGA 
ACACATTAGA ACAAGCCAAG AAGGCACCTA GGGATATGAT GTCCTATCGT CTAAGAAAAT
TGCCCCAAAA TGCCAGACAA CTATATGAAA CCATATTGGG CATGTCGAAT ATCATGGACA
AATACAAAGA TCCTTTGGAT ATGAATACTG TTTTGGATAC AATTGACCTC GCACTGATTT
ACGAGAATGT AGATAAGCGG GAAAGGGAGA ATGGGCCTCA TCTGGAGTTG CAATACGACG
ACTTGGTAGT CAAGGAATTA CTACATTATT TCAAGAACTC GTTTTTTAAG TGGGTAAACA
AGCCAGAGTG TCCTCTTTGT CATAGCGAAA GTAATGTTGT CGGTCTCGGA GGATCTCGAT
TCAGTGGGAG CCTGAATCCG GACCAGGTTT CAGTCGTTGA AAACTATCAA TGCCGTGAAT
GTAATAGTAG AATCCAGTTC CCTAGAGTTA ATAACCCTGT TTCACTCTTG AAAACTCGTA
GAGGCCGATG TGGAGAATGG GTCAATTGCT TCACCCTCAT ACTCAGAGCC ATGATTGCAG
AAGATAGAGA TAGAGTCAGA TATGTTTGGA ACATGGAAGA CCATGTATGG TGTGAGTACT
ATTCGTATGG GTTGAAGAGG TGGGTCCATT TAGATCCCTG TGAAGCTGTA TTTGATGAGC
CTCTACTCTA CTGTAACAAT TGGAATAAAA AGATGAGTTT TGTCATTGGT TACAACGACA
ACTATATAAT AGACTTGAGT TCGAAATATA TCACAGATTC CAACCAAATC GACAAAAGCA
CCATAATTCC GTCTTTGAAA CAACTTCTGA GATTTATCAA TGCAATAAAT TGCAATAAAT
TGCTTAGGTA TTACAAATGT TTGGATACCG CTTCACAGGA TGAGAAATTA ACCAAATGCT
ACAATGATGT GATAGTTGTT CTCAATCGTG AGCTTTTGCA ACTTAAAGAC CACAAAGTAA
CGCCCACAAT GACTCAAGAA TTGCCTAAAG GTAGACAAAC AGGAAGTTCT GAGTGGACCA
AAGAAAGAGG AGAGGACGGA AACTAACTGA TGGTTCGCAG TTTTAAGTAG ATAGATTAAT
AAATGACATT GCGAC
 
Protein sequence
MMSYRLRKLP QNARQLYETI LGMSNIMDKY KDPLDMNTVL DTIDLASIYE NVDKRERENG 
PHSELQYDDL VVKELLHYFK NSFFKWVNKP ECPLCHSESN VVGLGGSRFS GSSNPDQVSV
VENYQCRECN SRIQFPRVNN PVSLLKTRRG RCGEWVNCFT LILRAMIAED RDRVRYVWNM
EDHVWCEYYS YGLKRWVHLD PCEAVFDEPL LYCNNWNKKM SFVIGYNDNY IIDLSSKYIT
DSNQIDKSTI IPSLKQLSRF INAINCNKLL RYYKCLDTAS QDEKLTKCYN DVIVVLNREL
LQLKDHKVTP TMTQELPKGR QTGSSEWTKE RGEDGN