| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72104 |
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| Symbol | IDP1 |
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| ID | 4838985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 379353 |
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| End bp | 380943 |
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| Gene Length | 1591 bp |
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| Protein Length | 434 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390300 |
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| Product | Isocitrate dehydrogenase [NADP], mitochondrial precursor (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) |
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| Protein accession | XP_001384028 |
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| Protein GI | 126135008 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0593553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTGAAGTGG CCCCAAACAT CAATCAGACC GTTGCTGCCA CTCTTTAGCC ATTTATCATG
TTTAGAGCCT CCATTTACAA ACATTCCGCC CACAGGGCCC TTTCAGCCAG AAGCTTCTCG
GTTTCTGCCG CAGCCTTGGC CAAGATCAAG GTCAAAAACC CCATTGTCGA GTTGGACGGT
GACGAAATGA CTAGAATCAT ATGGCAGAGA ATCAAGGATA AGTTGATAAA CCCATACTTG
GACATCGACT TGAAGTACTA TGATTTGGGC ATCGAGTCCA GAGATGCTAC TGACGACAAG
ATCACTATCG ACGCAGCCAA TGCCATTAAG GAATACGGAG TTGGGGTCAA ATGTGCCACC
ATTACTCCCG ACGAACAGAG AGTCGAAGAA TTCGGCTTGA AGAAAATGTG GTTGTCTCCC
AATGGTACCA TCAGAAACAT ATTGGGTGGT ACCGTCTTCA GAGAATCCAT TATCATCCCC
AGAGTGCCTA GACTTATTCC TGGCTGGAAG GAGCCTATTG TCATTGGTAG ACACGCCCAT
GGAGACCAGT ATAAGGCTAC AGACTTGGTT ATCAGCGAAC CAGGTAAGGT TGAGTTAGTA
TTTACTCCTG CAAATGGTGG AGCCCCAGAA ACCAGGACTG TCTACGACTA CAAGAGTCCT
GGTGTAGCCT TGGCCATGTA CAATACTGAT GAGTCTATTC GTGGTTTTGC ACACTCCTCG
TTCAAGATGG CCTTGACCAA GAAGTTGCCT TTGTACATGT CTACCAAGAA CACCATCTTG
AAGAAGTACG ACGGTAGATT CAAGGACATC TTCCAAGAGA TATACGAAGC CGAATACGCA
TCTCAATTCA AGGCTGCTGG CTTGTGGTAC GAACACAGAT TGATCGATGA CATGGTAGCC
CAGATGATCA AGTCTAAGGG AGGCTTTGTC ATGGCCTTGA AGAACTACGA CGGTGATGTA
CAATCCGACA TCGTTGCTCA AGGGTTTGGA TCCTTGGGCT TGATGACTTC CGTGTTGATG
ACTCCAGACG GAAAGGCTTT CGAATCGGAG GCTGCCCACG GAACTGTCAC CAGACATTAC
AGACAACACC AGCAAGGTAA GGAGACTTCC ACCAACTCCA TTGCTTCTAT CTTTGCTTGG
TCCAGAGGTA TTGCCCAAAG AGGTAGACTC GACAACACCC CAGAAGTTGT CGACTTCGCA
AACACTCTTG AAAAGGCTAC CCTTGACACT GTGCAAGAAG ATGGCATCAT GACCAAGGAC
TTGGCTTTGG CTTGTGGTAA GACCGACAGA GCCTCTTATG TGACTACAAC CGAGTTTTTG
GATGCTGTTG CCGACAAATT GAAGGCTCAA GTCAAGGTCT AGATCACGAC TGGAGTTAGC
GGAACAGTCG GAAGCTGTGC TATCTAGTCC TGTTCTATTT TTTTTTGTTT AGTTCACCAT
CTACTTTCTA CAATTCTCTA CTCTTAAGAA TAGAGGATAA ACTCTATCGT ATAGACCCTT
ACATAGCAAC TACGAAATGC TCACTAATTT ACAACTTGTT GTATATATCG TATGGAGCTC
TGATTCTTTG TATACACATA CCCTGCTTTC A
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| Protein sequence | MFRASIYKHS AHRALSARSF SVSAAALAKI KVKNPIVELD GDEMTRIIWQ RIKDKLINPY
LDIDLKYYDL GIESRDATDD KITIDAANAI KEYGVGVKCA TITPDEQRVE EFGLKKMWLS
PNGTIRNILG GTVFRESIII PRVPRLIPGW KEPIVIGRHA HGDQYKATDL VISEPGKVEL
VFTPANGGAP ETRTVYDYKS PGVALAMYNT DESIRGFAHS SFKMALTKKL PLYMSTKNTI
LKKYDGRFKD IFQEIYEAEY ASQFKAAGLW YEHRLIDDMV AQMIKSKGGF VMALKNYDGD
VQSDIVAQGF GSLGLMTSVL MTPDGKAFES EAAHGTVTRH YRQHQQGKET STNSIASIFA
WSRGIAQRGR LDNTPEVVDF ANTLEKATLD TVQEDGIMTK DLALACGKTD RASYVTTTEF
LDAVADKLKA QVKV
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