Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_72098 |
Symbol | |
ID | 4838824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 416094 |
End bp | 417425 |
Gene Length | 1332 bp |
Protein Length | 425 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640390139 |
Product | predicted protein |
Protein accession | XP_001384037 |
Protein GI | 150864996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.729741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CATGACGTCG TTTGCCCAGT CCAGCTCGTG GACATCGTTC CTCAAGTCAA TTGCGCTGTT CAACGGTGAC TTGTCTTCCT TGACCGCCCC TCCCTTCATC TTGTCTCCAA CTTCCTTGAG TGAGTACTCA CAGTACTGGG CCGAGCATCC GGATTTGTTG GTAGAGCCAA ACTTCTTGCA ACAGACCCCT GATGCTTCCA AGGAGGAAGT CGATGCTATG GCGCTCAAGA GAATCATCGC CGTCACCAAG TGGTTCATAG CAACCTTGAG ATCACAATAC TGCTCCAGAA ACGAGTCGAT GGGCTCGGAA AAGAAGCCAT TGAACCCATT CTTGGGCGAA GTATTCGTAG GCAAATGGGA AGACACAGAG ACTACCGACG GCTCGCTTGG TGAAACCATC TTGTTGAGCG AACAGGTGAG CCACCACCCT CCAGTGACGG CTTATGCTGT CCATAATGCT AAGAACAGCG TAGTATTACA GGGCTACAAT GGTATCAGAT CCAGCATCTC TGCTACTTCC ATCAATGTTA AACAATATGG CCATGCTCTT TTGGAGTATA AGGAATTGGA CGAGTCGTAC TTAATCACGT TACCTCCATT ACACATTGAA GGTTTGATCT CGGCTTCTCC CTTTGTAGAG TTGGAAGGTA CTTCTTACAT TCAGAGCTCC AACGGATACA TTACTGTAGT TGAGTATTCG GGCCGAGGCT GGGTTTCAGG CAAGAAGAAC ACCTTCAAGG CCAGAATATA CAAGGACCAG TTGTCTCTGA ACAAGAAGGA AAATGCTCTT CTCAGCATCA GTGGTCAATG GTCTGGTAAA TCGTACTACG CCAAGGGCTA CTCTTCACCT AACTCGAAAA ACGACTTGTT TTACGATGCG CAGGCATCCG AGCCGCACCA TCTCAAGGTT AAGCCCATTG AAGAACAGCA CGAATTGGAG CTGAGAAAAG CCTGGCTCAA GGTCGCCGAA GCCATCAAGA AGTCCGACTA CGACTTGATC AACGAAGAAA AGACGTTGAT TGAAAACGCC CAACGTGACT TGAGAAAGCA AGAAGCTGAG TCTGGCGACA AGTGGCAGAC TAGATGGTTC GACTATGTCA ACTATCTCGA TGGCACAGTC TCTCACGATG CATTCTTGAA CTTGACCAAC ATTTCTAACT TGTCTATTCG TAATGCTCCT TCGGGCTCGT TGAAGGGCTC CAAATACGAC GAGGGCGAAG CCCAGCACTG GCGAATCAAC ATCCAGAAGT GGCAGGACGA GAAGGAGATC AAGATTTGAG TAACGGTTGT TTTATGCTAT GTTTATGGAA CTTTGATTAA TACAGATTAT AC
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Protein sequence | MTSFAQSSSW TSFLKSIASF NGDLSSLTAP PFILSPTSLS EYSQYWAEHP DLLVEPNFLQ QTPDASKEEV DAMALKRIIA VTKWFIATLR SQYCSRNESM GSEKKPLNPF LGEVFVGKWE DTETTDGSLG ETILLSEQVS HHPPVTAYAV HNAKNSVVLQ GYNGIRSSIS ATSINVKQYG HALLEYKELD ESYLITLPPL HIEGLISASP FVELEGTSYI QSSNGYITVV EYSGRGWVSG KKNTFKARIY KDQLSSNKKE NALLSISGQW SGKSYYAKGY SSPNSKNDLF YDAQASEPHH LKVKPIEEQH ELESRKAWLK VAEAIKKSDY DLINEEKTLI ENAQRDLRKQ EAESGDKWQT RWFDYVNYLD GTVSHDAFLN LTNISNLSIR NAPSGSLKGS KYDEGEAQHW RINIQKWQDE KEIKI
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