Gene PICST_72098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_72098 
Symbol 
ID4838824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp416094 
End bp417425 
Gene Length1332 bp 
Protein Length425 aa 
Translation table12 
GC content48% 
IMG OID640390139 
Productpredicted protein 
Protein accessionXP_001384037 
Protein GI150864996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.729741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CATGACGTCG TTTGCCCAGT CCAGCTCGTG GACATCGTTC CTCAAGTCAA TTGCGCTGTT 
CAACGGTGAC TTGTCTTCCT TGACCGCCCC TCCCTTCATC TTGTCTCCAA CTTCCTTGAG
TGAGTACTCA CAGTACTGGG CCGAGCATCC GGATTTGTTG GTAGAGCCAA ACTTCTTGCA
ACAGACCCCT GATGCTTCCA AGGAGGAAGT CGATGCTATG GCGCTCAAGA GAATCATCGC
CGTCACCAAG TGGTTCATAG CAACCTTGAG ATCACAATAC TGCTCCAGAA ACGAGTCGAT
GGGCTCGGAA AAGAAGCCAT TGAACCCATT CTTGGGCGAA GTATTCGTAG GCAAATGGGA
AGACACAGAG ACTACCGACG GCTCGCTTGG TGAAACCATC TTGTTGAGCG AACAGGTGAG
CCACCACCCT CCAGTGACGG CTTATGCTGT CCATAATGCT AAGAACAGCG TAGTATTACA
GGGCTACAAT GGTATCAGAT CCAGCATCTC TGCTACTTCC ATCAATGTTA AACAATATGG
CCATGCTCTT TTGGAGTATA AGGAATTGGA CGAGTCGTAC TTAATCACGT TACCTCCATT
ACACATTGAA GGTTTGATCT CGGCTTCTCC CTTTGTAGAG TTGGAAGGTA CTTCTTACAT
TCAGAGCTCC AACGGATACA TTACTGTAGT TGAGTATTCG GGCCGAGGCT GGGTTTCAGG
CAAGAAGAAC ACCTTCAAGG CCAGAATATA CAAGGACCAG TTGTCTCTGA ACAAGAAGGA
AAATGCTCTT CTCAGCATCA GTGGTCAATG GTCTGGTAAA TCGTACTACG CCAAGGGCTA
CTCTTCACCT AACTCGAAAA ACGACTTGTT TTACGATGCG CAGGCATCCG AGCCGCACCA
TCTCAAGGTT AAGCCCATTG AAGAACAGCA CGAATTGGAG CTGAGAAAAG CCTGGCTCAA
GGTCGCCGAA GCCATCAAGA AGTCCGACTA CGACTTGATC AACGAAGAAA AGACGTTGAT
TGAAAACGCC CAACGTGACT TGAGAAAGCA AGAAGCTGAG TCTGGCGACA AGTGGCAGAC
TAGATGGTTC GACTATGTCA ACTATCTCGA TGGCACAGTC TCTCACGATG CATTCTTGAA
CTTGACCAAC ATTTCTAACT TGTCTATTCG TAATGCTCCT TCGGGCTCGT TGAAGGGCTC
CAAATACGAC GAGGGCGAAG CCCAGCACTG GCGAATCAAC ATCCAGAAGT GGCAGGACGA
GAAGGAGATC AAGATTTGAG TAACGGTTGT TTTATGCTAT GTTTATGGAA CTTTGATTAA
TACAGATTAT AC
 
Protein sequence
MTSFAQSSSW TSFLKSIASF NGDLSSLTAP PFILSPTSLS EYSQYWAEHP DLLVEPNFLQ 
QTPDASKEEV DAMALKRIIA VTKWFIATLR SQYCSRNESM GSEKKPLNPF LGEVFVGKWE
DTETTDGSLG ETILLSEQVS HHPPVTAYAV HNAKNSVVLQ GYNGIRSSIS ATSINVKQYG
HALLEYKELD ESYLITLPPL HIEGLISASP FVELEGTSYI QSSNGYITVV EYSGRGWVSG
KKNTFKARIY KDQLSSNKKE NALLSISGQW SGKSYYAKGY SSPNSKNDLF YDAQASEPHH
LKVKPIEEQH ELESRKAWLK VAEAIKKSDY DLINEEKTLI ENAQRDLRKQ EAESGDKWQT
RWFDYVNYLD GTVSHDAFLN LTNISNLSIR NAPSGSLKGS KYDEGEAQHW RINIQKWQDE
KEIKI