| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72090 |
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| Symbol | PMI1 |
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| ID | 4838537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1281655 |
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| End bp | 1283066 |
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| Gene Length | 1412 bp |
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| Protein Length | 439 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640389852 |
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| Product | mannose-6-phosphate isomerase |
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| Protein accession | XP_001384544 |
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| Protein GI | 150865360 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1482] Phosphomannose isomerase |
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| TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.800208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCATACCAGA CTATCCGTTC TTTCACCAAT GTCACTCTTC AGAATCAACT GCGGCTACCA
AAACTACGAC TGGGGTAAAA TCGGGTCTAC CTCAGCAGTA GCCCAGTTTG CTTCCAGCTC
CGATGCCTCT GTCTCTATCG ACAACTCCAA ACCTTATGCT GAATTGTGGA TGGGTACACA
CCCTTCGGTT CCCTCTGTCG CTGTTGATGG AGGTGCAGAC GTCGAAGGCA AGACCTTGCG
TGACCTTGTC TCTGCGCATC CACAGCAGTT GTTGCACCAG TCGATTATTG ACAAGTTTGG
CTCCAACAAG GAATTGCCAT TTCTCTTCAA GGTTCTTTCC ATTGAAAAAG TTTTGTCGAT
TCAAGCTCAC CCCGACAAGA AGTTGGGTGC CATTTTGCAT GCAGCAGACC CCAAGAATTA
CCCTGACGAT AACCACAAGC CTGAGATGGC TATTGCTGTG ACGGAGTTTG AAGGTTTCTG
TGGCTTCAAG CCTTTAGAGC AATTGGTCCA GACGCTAAAG ACTATTCCGG AGTTGCATGA
CATCATCGGG GCCGAGCTCG TTGCTGAGTT TGCTTCTGGA GTGAAGCCTC TGGCCACTGT
AGGTTCCGAG GAAGACGCTT CTAACAGAAA GTTACTTCAG AAGGTATTCG GAAAGTTGAT
GAACACTGAC GAATCTACAA TCGCTACCAA GGCAGAGTCG CTTGTTGCCC GTACAAAGTC
TGAACCAGAA CTTTTCACTG CTATTGATTC CAGATTGCCC GAGTTGATTC AGCGTTTGAA
CGGCCAGTTC CCTAAGGACA TTGGCTTATT CTGTGGCTGT CTCTTGTTGA ACCACGTAGC
CTTAAATGCC GGCGAAGCCA TGTTCTTGCA GGCTAAAGAC CCTCATGCCT ACATTTCGGG
AGATATCATC GAATGTATGG CTGCCTCCGA CAATGTTGTC AGAGCTGGTT TCACACCAAA
GTTTAAGGAC GTCAAGAACT TGGTTGAAAT GTTGACTTAT TCATACGACT CCGTCGAGAA
ACAGAAGATG CCACTTTTGC CTTTTGCCAA GTCTCACGGT GAAGCTGTCA AGTCTGTCTT
GTACGATCCA CCTATTGCCG AGTTTGCCGT TTTGCAAACT ATTTTTGACA AGAAGGCTGG
CAAGGTCCAA CACTTTGACG GCTTTGATGG TCCTTCTATC GTCATCGCCA CAAAGGGTAA
CGGTACCATC TCTGTCAAGG GCAGCTCCGA CGTCAAGGAA GTCAAGACAG GCTACGTTTT
CTTCGTTGCT CCTGGTGTTG AAATCGAGTT GGTCAGTGGT TCTGATGACA ACGAGTTCAC
CACCTACAGA GCCTTTGTGG AAGCCTAAAC GTACACTCAA ATACAGTAAT GTCTACATAA
CACGAATATA TTAATAGATA AGAACAAAAC AC
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| Protein sequence | MSLFRINCGY QNYDWGKIGS TSAVAQFASS SDASVSIDNS KPYAELWMGT HPSVPSVAVD
GGADVEGKTL RDLVSAHPQQ LLHQSIIDKF GSNKELPFLF KVLSIEKVLS IQAHPDKKLG
AILHAADPKN YPDDNHKPEM AIAVTEFEGF CGFKPLEQLV QTLKTIPELH DIIGAELVAE
FASGVKPSAT VGSEEDASNR KLLQKVFGKL MNTDESTIAT KAESLVARTK SEPELFTAID
SRLPELIQRL NGQFPKDIGL FCGCLLLNHV ALNAGEAMFL QAKDPHAYIS GDIIECMAAS
DNVVRAGFTP KFKDVKNLVE MLTYSYDSVE KQKMPLLPFA KSHGEAVKSV LYDPPIAEFA
VLQTIFDKKA GKVQHFDGFD GPSIVIATKG NGTISVKGSS DVKEVKTGYV FFVAPGVEIE
LVSGSDDNEF TTYRAFVEA
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