Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_72069 |
Symbol | DAL7 |
ID | 4838665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 947951 |
End bp | 949892 |
Gene Length | 1942 bp |
Protein Length | 520 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389980 |
Product | putative MFS allantoate transporter |
Protein accession | XP_001384136 |
Protein GI | 150865072 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.145167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TAACGCTAAA ACATTGTCCG CTGCAACTCT TCATCACCCC AAGACTTCCC GCCCCTTAAG CCGTTCATTT TTTCTTCACT AAATGAAATT TCACTTAGGC ACTGTCTAAC TACTATTTAG TATCACCTGA ACACCGAGAT TTCTCGGAAA GGCAGCAAAT AATTTCTGCT AAAGTATCTC CTTTTCTTTC AGATTTGATA GTGTGTGTTC TTTCGTCGTT TCCGCCATCC TTCTATACGT TTCTCATTGA TAGACCATTG TCTCTTGGGT CTTACGTACT TATTTAGGTG CAGAACCAGA ATTTTGTCTT CCTATAGCTG TTAAATACTT CAGAATGGGT GGATGGACGA TTGTTGGAGA CTCTTTCAAG GGAGGTGATG TGAAGCTAGT GACTGAACAT TTAATTGAAC TGTCCCGGAA GTCGAATGTA GACTATGGTG CCGAATTTCT CGCTGAAAAC GAACACCAAT ACCCTCCGGC GACCGAAGAT GAAGAAAGAA GAATTATAAA AAAACTTGAT TTCATCTTGG TACCGATGCT TTTCTTCACA GCGACGATGG GAGCAGTTGA CAAGGTTTCC CAGGGTACAG CGGCGATTTA TGGCTACATT CCGGACAATA ATTTAACAGG ATCTCAGTAT TCCTGGCTAG GATCAATTCT TTTCCTTGGT TCCTTAGTCG GGATGTTCCC CATGTCCTTT TTCTTGCAGA GGTTTCCATT GGGAAAAGTT CTAGTAACCG CTTCACTTTT CTGGAGTAGT TTAACACTTC TATTGTGTGT TGGTAGAAGT TTCGCTGGGT TGGCTGCTAT TCGGTTTCTT ATGGGGTTTG TCGAATGTGC TATTGTCCCT GGGTGTACTC TTGTCTGCGG AAGATTTTAT TCCAAGGGAG AAATTGCTAC TCGTTTGGCT TTTGTTTTTG CCTTTGCTTC TTCAGTTATT AATGGGTTTT TGTCATGGTT GGTTGGTTAT TTTCATCATT CCACAGTCCC AGCCTGGAAG TTTCTCTACA TCTTGGTGGG TTCTATTTCA TTTCTTTGGG GTTGTCTCAT GTGGGTATAT TTGCCAGATT CTCCCTTGAA CGCCAAATTT CTTACCAACC AAGAAAAGGT CTACGTCGTG AGACGGATTA TCAGAAAAAG CAATGGCGGT GTTCAGAATA ATAATTGGGA TTGGCAACAA GTCAAGGAGG CAGTTCTCGA CAGCAAAACT TATGTCATAT TCTTTTTCAA CATTGGTATA AATATTTGCA ATGGTGGTCT CTCAACGTTT TCTTCCATAA TCATTTTTAA CCTTGGATTT AATGCAATGA AAGCATCGTT GATGGGTATT CCAACAGGTG TCATTGCAAC CCTTGCTACC ATTTTCTTCA CGTTTTTATG TAACAAATTC AACAACAAGC GTTGCTTGAT TGCAATTATT TCACTTATAC CTCCGGTTGT TGGGTCAGCT ATCATATATG CCGTGGACCG GCTGAACGTG GCACCGCAAT TGGTTGGTCT CTACTTGCTT TATTTCTACT TTGCTCCGTA CGTCGTGATG ATGTCCCTTG CCCAAGCTAA CACTTCTGGA AACACCAAGA AATCTGTCAC CTATTCTATC AATTATTTGG GTTATTGTGT GGGAGCTCTT ATTGGCCCTC AAACTTTTAG GGCTAACCAG GCTCCAAGAT ACACTGGAGG TTTTATCGCC TTGCTTTGTT CTTTCCTTAT TTGCATGATG TTTGCTGGCA TATATTGGGC GATATGTATT TGGGAGAATT CCAAGAAATC GAGGAAGTAC GACGAAAACG AAGTGTATCT GGAAAAGCCG GTGTCCAGAG ATGAAAAGGA GATTGACGAT GAGGAATATT ACGATCTATC TGATTCCCAG CGAAAGCATT TCCGTTACAC TACATAGTAA TTAGAGTACA ATTAATTTAA TTCAACGACT TATAAGACTT TC
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Protein sequence | MGGWTIVGDS FKGGDVKLVT EHLIESSRKS NVDYGAEFLA ENEHQYPPAT EDEERRIIKK LDFILVPMLF FTATMGAVDK VSQGTAAIYG YIPDNNLTGS QYSWLGSILF LGSLVGMFPM SFFLQRFPLG KVLVTASLFW SSLTLLLCVG RSFAGLAAIR FLMGFVECAI VPGCTLVCGR FYSKGEIATR LAFVFAFASS VINGFLSWLV GYFHHSTVPA WKFLYILVGS ISFLWGCLMW VYLPDSPLNA KFLTNQEKVY VVRRIIRKSN GGVQNNNWDW QQVKEAVLDS KTYVIFFFNI GINICNGGLS TFSSIIIFNL GFNAMKASLM GIPTGVIATL ATIFFTFLCN KFNNKRCLIA IISLIPPVVG SAIIYAVDRS NVAPQLVGLY LLYFYFAPYV VMMSLAQANT SGNTKKSVTY SINYLGYCVG ALIGPQTFRA NQAPRYTGGF IALLCSFLIC MMFAGIYWAI CIWENSKKSR KYDENEVYSE KPVSRDEKEI DDEEYYDLSD SQRKHFRYTT
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