| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67692 |
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| Symbol | GFA1 |
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| ID | 4838786 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1630636 |
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| End bp | 1633842 |
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| Gene Length | 3207 bp |
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| Protein Length | 696 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390101 |
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| Product | glucoseamine-6- phosphate synthase |
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| Protein accession | XP_001384265 |
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| Protein GI | 126135482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCTTAAGAGT ATATTATAAG CTGCGTATCC TGCCCCCTCT TAGTAGGTCT AATACATCCT
TTTTACACCC CTAGTTCCTG GTTCCCCGTA CTCAGATATA CAGCCCCAGA ATTCATTCAC
GGCGACAACC CCCTCTTATC CGAAAGACAA TTCTCATTGA ATCAGATTCA GAATTCTCAA
AACTTCACCA ATCTTTTTCT TCTCCTTTTT CTCCTTTTCT TTCTAGGAGA TTCCAACTGA
ACAGTCCCCC ATTGCATCCA TCTTTCACCG ACGGATCATC CACGTTCGCA AACGCCAGCT
TACATCCGCT TTAGCCATCG AACTTTCATA TTAATAAAAC ACGCTGTGAG AATCAACTAT
GTGGTACGTA TAGAATACAA ATGTCTTCAT GAACTTAACA GATAGGAAGA CGGCAAACAA
ATTACTCGAA GGCGAAGAGC CTCCTATTTT CAGATCTTCA GAGCAGCTTC ATATCAAAAT
TGGAAGACTT GAATAGCTAT AAATTCGAAG GTTTCTGGAG TCTTTTTTTT AGATTTGTTC
TATGCTTCGA TTCTTTTGAT TATTCGATAC AAGCTGTTTT TATAAAGGAT TCAAAAGCCA
AGCCAACATA CCCTTGTTCA AAATCATAAT AACGAGCTGA ACCACGTCGT TCTGATGTTT
GAAGAACGAA CCTTGAAACC GTACTCTAGA ATTGAAGCTT TTTTCTTTTT TTAGACTTCG
AGATTTTTGA GTCTTGAGAT TTTCGACATA GAATTTCTTT GATTCTCGAC TTTTCAATTT
TGGCTTGGGA TTTCACAGGT AGTTTGATTC TTATCTTTAC TGTTGTCTTC ATTAGTTTGT
CTTCACCAGA AGCACTCATA CTAACACATC TAGTGGTATC TTTGGTTACG TTAACTTCCT
TGTCGACAAG ACAAGAGGTG AAATTGTGGA CAACCTCATC GACGGACTCC AGAAGTTGGA
GTACAGAGGT TACGACTCGT CTGGTATTGC CATTGATGGC GATAACAAGG GCGAAACCAT
CATCGTCAAG ACTCCTGGTA AGGTTAAGGT GTTGAAGCAA AAGATAATCG ATGAAAAGGT
AGAAAGATCA ACTGTTTTTG ACAACCACGT CGGTATTGCT CACACAAGAT GGGCCACTCA
CGGCCAACCT ATGATTTCCA ACTGCCATCC TCACAGATCC GATCCTAGAG GCGAGTTTAT
CGTTGTTCAC AATGGTATTA TCACCAACTA CAGAGCTTTG AAGACTCTTT TGGTCTCTAA
AGGTTTCAAG TTTGAGTCGG AAACTGACAC TGAGTGTATT GCCAAGTTAT ACAAACACAT
CTATGACACA AACCAGAAGG CCGGCATTAT TGCTGACTTG AACGAATTGA CCAAGCAGGT
TTTATACGAG TTGGAAGGTT CCTACGGTCT TTTAGTCAAG TCTACTCACT ACCCTGGCGA
AGTGTGTGGT ACTAGAAAGG GTTCTCCCTT GTTGGTTGGT GTCAAAACCG AGAGGAAGTT
GAAGGTCGAC TTCGTAGATG TAGAATTCAC CGAGCCGGAA CCTGTTGTGA GTCACAACGC
CAACAGCAAG AACGAGTTGG GATTGTTGCC CGTTGCTGTA GGCGAACAAA ATTTGAGAAC
CTCGCAATCT AGAGCCTTTT TGTCTGATGA CAATATCCCC ATGCCAGTAG AGTTCTTCTT
GTCTTCTGAT CCTGCTTCCG TAGTACAGCA CACCAAGAAG GTTTTGTTCT TGGAAGATGA
CGACATTGCT CACATCTATG ATGGTGAGTT GCACATCCAC AGAGCCTCCA AGAAGAATGC
CGGAGAATCC ACTACCAGAC AGATCCAAAC CTTGGAGATG GAATTGAACC AGATCATGAA
GGGGCCATAC AAGCACTTCA TGCAAAAGGA AATCTTTGAA CAACCCGACT CTACTTTCAA
CACCATGAGA GGTAGAATCG ACTTCGAATC AAACACAATC ACATTGGGAG GCTTGAAGTC
GTTCTTGCCC ACAATCAGAA GATGCAGAAG AATCCTCATG ATAGCCTGTG GTACTTCCTA
CCATTCCTGT TTGGCCACCA GATCGATTTT TGAGGAATTG ACTGAGATTC CCGTGTCGGT
AGAATTGGCT TCTGATTTCC TCGACAGAAG ATCGCCTGTT TTCAGAGACG ATACCTGTGT
ATTTGTCTCT CAATCGGGTG AAACTGCCGA TTCCATCTTA GCTTTGCAGT ACTGTTTGGA
AAGAGGTGCC TTGACTGTAG GAATTGTCAA CTCTGTAGGT TCTTCTATGT CTAGACAGAC
TCACTGTGGT GTTCACATCA ACGCTGGACC TGAAATCGGG GTTGCCTCCA CAAAAGCCTA
CACTTCTCAG TACATTGCCT TGGTGATGTT TGCACTTTCT TTGTCCAACG ACTCTGTTTC
CAGACAAGAA AGACACAAGG AAATCATCCA AGGATTGCAA AAAATTCCAG AACAGATCAA
GAAGGTGTTG TTGTTGGAAG AAAAAATCAA GAGCTTGTGT GACTCCAACT TGAACGACCA
GAAGTCGTTG TTGTTATTGG GAAGAGGTTA CCAGTTCGCC ACGGCCTTAG AGGGTGCTCT
TAAGATCAAG GAAATCTCGT ATATGCACTC GGAAGGTGTT TTGGCTGGTG AATTGAAGCA
TGGTGTTTTG GCTTTGGTGG ATGACAAGTT GCCCATCATT GCCTTTGCAA CGAGAGACTC
GTTGTTCCCT AAGGTGATGT CTGCCATCGA GCAAGTCACT GCCAGAGACG GTAGACCCAT
TGTCATTTGT AACGAAGGAG ACGAGATCCT TTCTAGTGAC AAGGTTCTTG CAACATTGGA
AGTTCCAGAA ACCGTTGATT GTTTGCAAGG TTTGTTGAAT GTCATTCCAT TGCAATTGAT
GAGTTACTGG TTGGCTGTCA ACAGAGGTAT TGATGTTGAT TTCCCACGTA ACTTGGCCAA
GTCTGTCACT GTCGAATAGA CTTAGTCAGC AAGGCATAAT GAGACACATA CCTATATAGA
TTTCCCTATT TAACCACCCT CTACTGTTTT TATATCCGGC TTTTGTTCAT ATTGAGTACT
TATATATAAA ATGATTGCAA TGATAACATA ATGGTATACG GAGTAAGATT TAGCACAGTC
TTCATAGATT GCACTACTGA ACTACTTTTT ACTCTACATT GAGCTCTTTG GATCTAATTA
TATTAATATA TAAAAAAATG GTTGCAG
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| Protein sequence | MCGIFGYVNF LVDKTRGEIV DNLIDGLQKL EYRGYDSSGI AIDGDNKGET IIVKTPGKVK
VLKQKIIDEK VERSTVFDNH VGIAHTRWAT HGQPMISNCH PHRSDPRGEF IVVHNGIITN
YRALKTLLVS KGFKFESETD TECIAKLYKH IYDTNQKAGI IADLNELTKQ VLYELEGSYG
LLVKSTHYPG EVCGTRKGSP LLVGVKTERK LKVDFVDVEF TEPEPVVSHN ANSKNELGLL
PVAVGEQNLR TSQSRAFLSD DNIPMPVEFF LSSDPASVVQ HTKKVLFLED DDIAHIYDGE
LHIHRASKKN AGESTTRQIQ TLEMELNQIM KGPYKHFMQK EIFEQPDSTF NTMRGRIDFE
SNTITLGGLK SFLPTIRRCR RILMIACGTS YHSCLATRSI FEELTEIPVS VELASDFLDR
RSPVFRDDTC VFVSQSGETA DSILALQYCL ERGALTVGIV NSVGSSMSRQ THCGVHINAG
PEIGVASTKA YTSQYIALVM FALSLSNDSV SRQERHKEII QGLQKIPEQI KKVLLLEEKI
KSLCDSNLND QKSLLLLGRG YQFATALEGA LKIKEISYMH SEGVLAGELK HGVLALVDDK
LPIIAFATRD SLFPKVMSAI EQVTARDGRP IVICNEGDEI LSSDKVLATL EVPETVDCLQ
GLLNVIPLQL MSYWLAVNRG IDVDFPRNLA KSVTVE
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