Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67678 |
Symbol | |
ID | 4838883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1528186 |
End bp | 1529927 |
Gene Length | 1742 bp |
Protein Length | 553 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390198 |
Product | predicted protein |
Protein accession | XP_001384596 |
Protein GI | 150865397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.831959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CACGTTGTTC AAATCTATAT TCTCGCACAG CGCTACTGTC CTTCGTATGG CAGAATCCAG GAAACGCTCA GCTGCGTTCC TTTCTGCTTC TCGTCATTGG TCTTCGAAAA AGTCAGAGCC TGAACTGAAA AATACTGAGG ATACTGACAA TGATGATGTA GTAATTACAA AAGTAGTCCC ATTGACCCAG TCAGACAATT CAACTCCAAT AAACAAGAAA CAAAAGCTAG CTACGAGTAT ACGAAAAGCG TCTCCTATCA AATTGCTTCT GAATCCAAGC TACGATGACG AAGTCGAAGC TATCGTAAAT AAAGACACGA TCCTGATCGA AGACTTACTA GGTGCTTCAG ACCTAGACGA GACCTTTCAG TTCAATTTCA CTGTAGATTT GCCAATGTTC TTGAGATATT TAAATCCGAA ATTCCAGAGG AATGGGAAGA AAATTACCTT TGTCACTGGT TCAGTTCTTC TTGATCCATC TGATCCTGAT ACTCTGATCT TCAAGAACCA GTTCAATATC AGCGAAGTCA CAGCTGCGAT TCCCAATCGG TTCGGAACTC ATCATACCAA AATGATGGTC AACTTCTTTG AGGATAAGAG CTGTGAAATT GTCATTATGT CTTTCAACTT GAACAAAATC GATGTGGTGG GACTTACTCA AACGCTTTGG AGATCTGGTA GATTGCAGTT GGAAACCGAA GATTCGGTGA AATTGGAGCG TGGTGAAAAT TTCAAACGTG ACTTTATGAA CTACTTGAAG AAATACAATA GTCCCGTAGT CACTAGTTTG GCTGACAGAC TTCAATCGTA TGACTTTCAC TCTATCGATG TAGAGCTTCT TGCTTCAGCA CCAGGTAAAT ACGAAATCAC AAATCTAACT GATAAAGATG AAGTTTATGG CTACGGAAAG TTATACCAGA TATTGAAGAG AAATAATTTG CTAGTGGATA ACACGAAGGG AGACAAGTTG TATAACTTCC TTTCACAGGT GACTTCTATT TCATATCCTT TCAATGTCCG CGGAAGCCAA ACTGCCTCTG TCTTCAGCCA TCTTCTTGCT CCCTTAGTCT TTTCTGGAGG CTCGAATGGT TTCAAGATTC TACTTCCAGG ATCGGATAGT ACATCCAAAC ACCAAAAAGA CAACTACTAT TTACCCCACA TGGTGTATCC TACAGTAAAG GAAATAGCAA ATAACAATGT AGGATTTGGA GCAGGACAAG CAGTGCACAT GAAACATACA AAGTCTGATA CTCACAGATA CCAATACCAA CAGAATATCC GGCCGTACTT GAGAAAGTGG AATTCGTCCG GTTCAGACAT AGTCACGGGG AGAGAACTGG TAGTTCCACA TTGTAAATAC TTCATGTGCG ACAACGGTGA TAACTTTTCA TCCTTGAAGT GGGCATTGGT TGGAAGTCAC AACTTGTCTA AACAGGCCTG GGGATCACCA GTTCCCAAAT CTACGAATCC AAATAAGTAC GAAATCTCAA GCTTCGAGTT GGGAGTGGTA GTATTTCCTA AAGAAGGCGA GAAATTGGTA CCTGCTTATG GAGAAGACAC AGTGAATGAC GATAAAGCTA TTCCATTAAG GATGCCCTTC AGTCTTCCTC CGACGAAGTA CACCGCCCAA GATGAGCCAT GGAGTGAATG GGTCAGCTAC GGCGAATTAA AGGACAAATT TGGACAAACC TACAACTTGA GCAAGTAGCA AGACTATATA TACATAATAA ATACACTAAT GT
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Protein sequence | MAESRKRSAA FLSASRHWSS KKSEPESKNT EDTDNDDVVI TKVVPLTQSD NSTPINKKQK LATSIRKASP IKLLSNPSYD DEVEAIVNKD TISIEDLLGA SDLDETFQFN FTVDLPMFLR YLNPKFQRNG KKITFVTGSV LLDPSDPDTS IFKNQFNISE VTAAIPNRFG THHTKMMVNF FEDKSCEIVI MSFNLNKIDV VGLTQTLWRS GRLQLETEDS VKLERGENFK RDFMNYLKKY NSPVVTSLAD RLQSYDFHSI DVELLASAPG KYEITNLTDK DEVYGYGKLY QILKRNNLLV DNTKGDKLYN FLSQVTSISY PFNVRGSQTA SVFSHLLAPL VFSGGSNGFK ILLPGSDSTS KHQKDNYYLP HMVYPTVKEI ANNNVGFGAG QAVHMKHTKS DTHRYQYQQN IRPYLRKWNS SGSDIVTGRE SVVPHCKYFM CDNGDNFSSL KWALVGSHNL SKQAWGSPVP KSTNPNKYEI SSFELGVVVF PKEGEKLVPA YGEDTVNDDK AIPLRMPFSL PPTKYTAQDE PWSEWVSYGE LKDKFGQTYN LSK
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