Gene PICST_67678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67678 
Symbol 
ID4838883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1528186 
End bp1529927 
Gene Length1742 bp 
Protein Length553 aa 
Translation table12 
GC content41% 
IMG OID640390198 
Productpredicted protein 
Protein accessionXP_001384596 
Protein GI150865397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.831959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACGTTGTTC AAATCTATAT TCTCGCACAG CGCTACTGTC CTTCGTATGG CAGAATCCAG 
GAAACGCTCA GCTGCGTTCC TTTCTGCTTC TCGTCATTGG TCTTCGAAAA AGTCAGAGCC
TGAACTGAAA AATACTGAGG ATACTGACAA TGATGATGTA GTAATTACAA AAGTAGTCCC
ATTGACCCAG TCAGACAATT CAACTCCAAT AAACAAGAAA CAAAAGCTAG CTACGAGTAT
ACGAAAAGCG TCTCCTATCA AATTGCTTCT GAATCCAAGC TACGATGACG AAGTCGAAGC
TATCGTAAAT AAAGACACGA TCCTGATCGA AGACTTACTA GGTGCTTCAG ACCTAGACGA
GACCTTTCAG TTCAATTTCA CTGTAGATTT GCCAATGTTC TTGAGATATT TAAATCCGAA
ATTCCAGAGG AATGGGAAGA AAATTACCTT TGTCACTGGT TCAGTTCTTC TTGATCCATC
TGATCCTGAT ACTCTGATCT TCAAGAACCA GTTCAATATC AGCGAAGTCA CAGCTGCGAT
TCCCAATCGG TTCGGAACTC ATCATACCAA AATGATGGTC AACTTCTTTG AGGATAAGAG
CTGTGAAATT GTCATTATGT CTTTCAACTT GAACAAAATC GATGTGGTGG GACTTACTCA
AACGCTTTGG AGATCTGGTA GATTGCAGTT GGAAACCGAA GATTCGGTGA AATTGGAGCG
TGGTGAAAAT TTCAAACGTG ACTTTATGAA CTACTTGAAG AAATACAATA GTCCCGTAGT
CACTAGTTTG GCTGACAGAC TTCAATCGTA TGACTTTCAC TCTATCGATG TAGAGCTTCT
TGCTTCAGCA CCAGGTAAAT ACGAAATCAC AAATCTAACT GATAAAGATG AAGTTTATGG
CTACGGAAAG TTATACCAGA TATTGAAGAG AAATAATTTG CTAGTGGATA ACACGAAGGG
AGACAAGTTG TATAACTTCC TTTCACAGGT GACTTCTATT TCATATCCTT TCAATGTCCG
CGGAAGCCAA ACTGCCTCTG TCTTCAGCCA TCTTCTTGCT CCCTTAGTCT TTTCTGGAGG
CTCGAATGGT TTCAAGATTC TACTTCCAGG ATCGGATAGT ACATCCAAAC ACCAAAAAGA
CAACTACTAT TTACCCCACA TGGTGTATCC TACAGTAAAG GAAATAGCAA ATAACAATGT
AGGATTTGGA GCAGGACAAG CAGTGCACAT GAAACATACA AAGTCTGATA CTCACAGATA
CCAATACCAA CAGAATATCC GGCCGTACTT GAGAAAGTGG AATTCGTCCG GTTCAGACAT
AGTCACGGGG AGAGAACTGG TAGTTCCACA TTGTAAATAC TTCATGTGCG ACAACGGTGA
TAACTTTTCA TCCTTGAAGT GGGCATTGGT TGGAAGTCAC AACTTGTCTA AACAGGCCTG
GGGATCACCA GTTCCCAAAT CTACGAATCC AAATAAGTAC GAAATCTCAA GCTTCGAGTT
GGGAGTGGTA GTATTTCCTA AAGAAGGCGA GAAATTGGTA CCTGCTTATG GAGAAGACAC
AGTGAATGAC GATAAAGCTA TTCCATTAAG GATGCCCTTC AGTCTTCCTC CGACGAAGTA
CACCGCCCAA GATGAGCCAT GGAGTGAATG GGTCAGCTAC GGCGAATTAA AGGACAAATT
TGGACAAACC TACAACTTGA GCAAGTAGCA AGACTATATA TACATAATAA ATACACTAAT
GT
 
Protein sequence
MAESRKRSAA FLSASRHWSS KKSEPESKNT EDTDNDDVVI TKVVPLTQSD NSTPINKKQK 
LATSIRKASP IKLLSNPSYD DEVEAIVNKD TISIEDLLGA SDLDETFQFN FTVDLPMFLR
YLNPKFQRNG KKITFVTGSV LLDPSDPDTS IFKNQFNISE VTAAIPNRFG THHTKMMVNF
FEDKSCEIVI MSFNLNKIDV VGLTQTLWRS GRLQLETEDS VKLERGENFK RDFMNYLKKY
NSPVVTSLAD RLQSYDFHSI DVELLASAPG KYEITNLTDK DEVYGYGKLY QILKRNNLLV
DNTKGDKLYN FLSQVTSISY PFNVRGSQTA SVFSHLLAPL VFSGGSNGFK ILLPGSDSTS
KHQKDNYYLP HMVYPTVKEI ANNNVGFGAG QAVHMKHTKS DTHRYQYQQN IRPYLRKWNS
SGSDIVTGRE SVVPHCKYFM CDNGDNFSSL KWALVGSHNL SKQAWGSPVP KSTNPNKYEI
SSFELGVVVF PKEGEKLVPA YGEDTVNDDK AIPLRMPFSL PPTKYTAQDE PWSEWVSYGE
LKDKFGQTYN LSK