| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67638 |
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| Symbol | YWP1 |
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| ID | 4838710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1305917 |
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| End bp | 1307598 |
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| Gene Length | 1682 bp |
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| Protein Length | 393 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390025 |
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| Product | Fasciclin and related adhesion glycoproteins |
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| Protein accession | XP_001384549 |
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| Protein GI | 126136050 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.804506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0159998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATTTAACCTT TACTCTCGCT TATATTAATA AAAATGGTTA GACTCGGATC TATCGCTGCT
TTCACAGCCT TGTTGACTGC CCCATTGGCT CTCGCTCAAG ACGTTGCTTG TCAAGTTAAC
GGTGTCACCG TCCAAGTTGT TGACTTGGCT ACTGGTGTCT GTACTTTCCC AATTCCAGCT
GAATTGCCAA CTATCTTCGA ATTCAACTCT ATCCAAGATT TCAACGTTGA ATTCTACTAC
ACCATCGTTA ACAACATCAG ATACTTCACT GACATTGTCA ACGCCGGTAG AACTATCGAA
ATCCCAGCCA TCGAACTTTA CGGTGGTGCT AACGCCCCAT TGTACCAAGT CCACGTCGAA
GAACACCTCG CTTCCAACAC CACTCTTTCT ATCAGAAAGA GATTGTTGAA GCAAGTTGAA
CTTAACGAAA GAGATGCTGC TTCTGACTTC GCTGATTCCT TGAAGACTCT TGACGGTACC
TTGGTTAGTG ACACTACTTT CTCTGTTGTT GACGCTACTG GTGCTTCCTC TTCTTCTGAA
GGTACTGGTG CTTCTACTGG TGCTGGTGCT TCTTCCGAAG GTGGTGCTAC CACTGTCACT
GATGTTGCTA CCACTGTTGT CACCATTACT TCTTGTTCTG AAGACAAGTG TTCTTTGGCC
ACTGTCCCAG CTACTCCAAA GCTCACCACT GAGACCATCA ACGGTGTTGT CACTTCTTAC
ACTACTTACT GTCCTCTTAC TGAAGTTACT GAACTCTCTA CCACCGTTGT CACCATTACC
TCTTGTAAGG AAGACAAGTG TGTCTTGACC ACTGTCCCAG CTACTCCATC TGAAGCTACC
ACCACCGTTG AAGGTGTTGA AACCATCTAC ACCACCTACT GCCCAATTTC TGAAGAAACT
CCATACGTCA CCGTTTCTGG TACCCCAGTT CCAGCTACCC CAGCCGTTGT TTCTAAGACT
ACTGAAGGTG TTGTTACCTC TTACACCACT TTGGTTGCTG TTACCGAGAC TGTTGCTGCT
GCTGAACAAA CCCCAGCTGC TCCAGGTGCT CCAGAAGTCA CCCCAGCTGC TCCAGCTGCT
CCAGGTGTTG AAACTGTTGC CTCCGCTCCA GGTTCCACTG TTGCTCCAAT CAACACCTTT
GAAGGTGCTG CTGTTTCTAA CTACGGTAAG TCTTTGCTTG CCATTGCCTT GATTCCATTG
GCTTACTTGA TCTAATTTTC GTTGTGAAAA TTCTACAAAA CTTTAATAAA AGATTATTAC
ATGTTGATTA TAAAGGTGTA ATTAACGGAA TAATCTAATA TTAGGCGGTT ATGTTTTCCT
TCATTGTATC ACTTGTTAAT TAGTTCCAAA TGTTGAGTCC GAACAATCTA ACGTCAGGTT
CTGGTGAACT CTGAATTTCA GTCCGGGCTA CGTTCCAAAA TCATCCAGGG TCGGCGTTGG
AGTTACTCTC CATTAATTTC ACAGGTGTTC TTTCGCACCA CATACCTTTA ACTTATTTCA
TCCTCATGAT TCATGATTTT GCTGGGTCTT CGCCTACTTT CGTGGCTTGC ATATTTTCGG
TTAAATTAAA AAGTGCTTAC TTTTTACCGG TTGTTTTATA CATCTTCACT TCTCCTGTTC
ACTTAGTGTC TTGGAATATA ATTACATGAC CATAGTAGAT TACATATACG TTTAACTGGT
AC
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| Protein sequence | MVRLGSIAAF TALLTAPLAL AQDVACQVNG VTVQVVDLAT GVCTFPIPAE LPTIFEFNSI
QDFNVEFYYT IVNNIRYFTD IVNAGRTIEI PAIELYGGAN APLYQVHVEE HLASNTTLSI
RKRLLKQVEL NERDAASDFA DSLKTLDGTL VSDTTFSVVD ATGASSSSEG TGASTGAGAS
SEGGATTVTD VATTVVTITS CSEDKCSLAT VPATPKLTTE TINGVVTSYT TYCPLTEVTE
LSTTVVTITS CKEDKCVLTT VPATPSEATT TVEGVETIYT TYCPISEETP YVTVSGTPVP
ATPAVVSKTT EGVVTSYTTL VAVTETVAAA EQTPAAPGAP EVTPAAPAAP GVETVASAPG
STVAPINTFE GAAVSNYGKS LLAIALIPLA YLI
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