| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67626 |
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| Symbol | BED1.1 |
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| ID | 4838436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1218769 |
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| End bp | 1221220 |
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| Gene Length | 2452 bp |
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| Protein Length | 543 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389751 |
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| Product | zinc finger protein |
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| Protein accession | XP_001384188 |
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| Protein GI | 150865107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.482303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACAAGCTTAC AATTCAATTC TAATTCTTGT GTTTTTCCAA AGATTTTTGT TCATTATTAC
ACTTATGCAT AGTTCCAACC CTAATTAAAG AATCCATAGA TTGATCTTCA CTTCAGAACT
ACTATTCATT CTTTTTCGAC TTTTTTTCCC TTATACAGCA ATTTTATCTT TATTTTTCAC
TAGATTACAT CAATTGACAT CTAACATCGT TGCAAACGGA AACACCCTTG TCCTCGAGCA
CCTTCTTCCA CAGCCCATCT GATAGAACCA ACGGCATTTT CGGCATTTGC TCGATATCTA
CACCATTATT TCAAGCAAGC GATCACACCC AAGTCTTGGA ATTGTGATCC AACCTGTCTT
TCCCTTATTG TCTGAGGCAA TTGTCCCTAC CCTTCTGTGA AATAATTATA CACGTCTTCC
ACAGACACTG TCGTGGTAGT ATTAAGTGGA ACTGTTCAAT TTTAGCCTCC ACACGGTGTC
TATTATCGCC TTGGAAAATT GACTTCACTA TGTACTTGTA GTAGAAGGAT GTCCTCCGTA
CCTGAACAAA ATCCTGGCAG CGATAACAAC ACACTATCCA ATTCCACAAC CAAGGTCACG
GCTAATCAAT ATCTTGATTC AAATGTCTTT GCTGCTCCAC AACCAACCGC TCTGTCCGAG
GCGACAAGCG CCCCGAACGA ACAGACTTCA TCAGCACTTG GCTACTACCC CCAGTCGCTG
CAGAACACCC AACAGCCTCC AGTTCACTAC ATTGACCATG GGTTTCAGCA GCGAGCGACT
CTTCAAATGG TACCCCAGCA GCAAAATATG AATGTACAAC AATTGCTGCA ACCGCCACAA
CAAATACAAC AGCCGCCGGT ACAGTTCCAG CCTCTTGTAG TACAACAGCA TTATTATGCG
CCTCCTCCCA CAAACACGTC AGACTCGTTC TACCAACAGT CGCTTCACGA CCTTTCTTCT
TACGCATATG CACCCTCGGC AGTTCAGATC ATGGGTTCTA CTCCGGCAGT AGCTCAACCG
TACCTTGTTG CGACGCAGCA GTACGACGCT TTCCAGCAAC AGCAGCAAGC GCTGACGCTG
CAGCCACAAG CACAAGCACA AGCACAGCTC ACACAATCCT CACAATCCTC ACAATCCCAG
CAATTACAAA CGTTGCAACA GCAACAGCAA CAGCAGCAAC AACTACAACA ACAACAACAA
CAACAACAAC AACAACAACA ACAACAACAA CAATTGCAAA AAATGGCACA GCCATCTCCA
TTGCTTCCTA GTAATCCCAC CTACCAGGCG CCAGCTCAAG GTTCATACCA GCAAAGTAAT
TACATGCAAT TGCTTTTGGT ACCGACTCAG AAACGACAGA TCTCTACACC AAATGTATTG
GGCAGCTCAG TTTCTTCAAT TTCTGGAGAT CAATCTGCTG TCGGACTGAC TAATGACCAA
TTGAATTATA TGAACTCGTC GTTGCCGCCA TTGACTCCCT ACGGAAATAT TTATTCAGGA
AATCTCCAAC AGGGTCCTCT GCAGAGGTAC CAGACACTGC AACTGGGCCA ACAGCCCACC
GTGTCATTTC CATTAAATGC CCAGCAGCCA GTCTTGGGTC TTGGAAGTGG CCAGATGTCT
GGTCAAGCAC CTCCCTACGT AAAAATGGAT TACGATTTCA GCGGTGCTAC AGGATCTTCT
TTTTCTGTAA TGCCCAATGT AGACGGATCT ATAACATCTG CTTCATCTTC AGCCAATGAC
ATACCAAAAA AAGGTCGGAG AAGAAGCAGC AAGTCTTCCC ACATTATGAC TCCAGAGACA
GCCGAGAGAA ATCGATGCAG AATTTGCAAC AAACAGTTCA AGAGACCTTC ATCACTTCAA
ACCCATTACT ACTCACATAC GGGAGAAAAG ATCTTCAAAT GTCCCTGGCC CGGTTGTGGG
AGATTGTTTT CTGTCAAGTC AAATATGACG AGACACTACA GACTTCACGA AAGAGATTTC
AACAAACAGA ACGACAAGGA ACTCAACCCC ACTACCTTGC CCCGGGATCT AGAGTTATAT
CCTTCCAAAA TCCTGTCCTC TAGCAATCCT ACTTCAACTA CTACTACTGC TAATAATAAT
GCATTGGAGG GCAGCTACAA TTATCAACAG CCTAACATTA AAAAACAAAT ACTGGAATAA
TCAAAATTGA AAAATCTACT GCCAACATCT TATAACCCCA GGACTACGAA AGAGCTGGTG
TTGAAGAGAT TTTTCTAGCC AATAGAACTA TTTCCCTCAA AAAAGGTATT TACTGTCTGA
CAGGAAAATA GAGTAAAGAC AGAAACATAT CGCCTGGGGA ATATACAGAA TAGTCTTTCG
ACTACTCGAA CTTAGCCCAT AGCTAGGATG ATAGCGACCG GCATCATTCT GCATGGGTCA
AATGTATGTA TCATTAGTGT ATAATAATAC AATAACCTGA ATTATCTCTC CT
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| Protein sequence | MSSVPEQNPG SDNNTLSNST TKVTANQYLD SNVFAAPQPT ASSEATSAPN EQTSSALGYY
PQSSQNTQQP PVHYIDHGFQ QRATLQMVPQ QQNMNVQQLS QPPQQIQQPP VQFQPLVVQQ
HYYAPPPTNT SDSFYQQSLH DLSSYAYAPS AVQIMGSTPA VAQPYLVATQ QYDAFQQQQQ
ASTSQPQAQA QAQLTQSSQS SQSQQLQTLQ QQQQQQQQLQ QQQQQQQQQQ QQQQQLQKMA
QPSPLLPSNP TYQAPAQGSY QQSNYMQLLL VPTQKRQIST PNVLGSSVSS ISGDQSAVGS
TNDQLNYMNS SLPPLTPYGN IYSGNLQQGP SQRYQTSQSG QQPTVSFPLN AQQPVLGLGS
GQMSGQAPPY VKMDYDFSGA TGSSFSVMPN VDGSITSASS SANDIPKKGR RRSSKSSHIM
TPETAERNRC RICNKQFKRP SSLQTHYYSH TGEKIFKCPW PGCGRLFSVK SNMTRHYRLH
ERDFNKQNDK ELNPTTLPRD LELYPSKISS SSNPTSTTTT ANNNALEGSY NYQQPNIKKQ
ISE
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