Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67514 |
Symbol | YPO7 |
ID | 4838845 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 535780 |
End bp | 538129 |
Gene Length | 2350 bp |
Protein Length | 708 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390160 |
Product | Fe-S oxidoreductase |
Protein accession | XP_001384062 |
Protein GI | 150865016 |
COG category | [C] Energy production and conversion |
COG ID | [COG0731] Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCTCTCTAGT ACCATTATGG GGGCAGGATC AGGTTTATTA GTAGTTTGTG GAGTGGTCCA TGCTATTTCG GGTGGACGAA TCTCGCTCTT AGTAGCAGCC ATCGCACTCT ACATCTTGTA TAATTTAGAG AAGAGTTCTA GATCCATCAG TTCCAAGAAT GAGCCACCAA ATCCAACCAA AAAGTCGATT TTGAAGATGG TCACCAAGCC AAAATCGGCA GCAGATCAGA ATAAGGAATT ACTGAAAAAG AGTGAATCTC CAATCTATGC AGTTGATTTC ACATCTACTT CCTTTACTCC TAGTGGAACC TCTGTGATTC CTAAAAGAGA AGTCAGAACC ACCAGAGCAA AAAGAACTCC CAAGGTGTTT AAAAAAGCCA TGCCAGTCAA GAGCATTGTC GAGCCAACTA TGACAAAGTC AGAAGTGAAG CTTTTGGAGT CGCAAATCTA TATTTTCTAT ACTTCGTTAA CTGGCTCTTC TCAGAGAGTA GCGACTGCTT TGAAAGAAAA GCTTGAAGGC TTGGAAGACT TGCAGAACGA ACCCAAGTTG ATGAGTCTTG ATGATGATGT CGACGATCTT GAAGAATACT TCTTGAAAAC TCCAGATAAC GGGGCTACCA AGAACATCTA CTTGTTGGTT TTGCCATCTT ATGAGACCGA TTCTCCTATT GACTATTTCC TTGAGCATTT GAAGGATACT TACCAGGATT TCAGAGTCGA CAAATACCCT ATGAGGACGT TATTGGGTTT TGCTATTTTG GGTTTGGGAG ACTCAGAATC GTGGAGTGGA GACAAATTCT GCTATCAAGC CAAATTGGCT GATAGATGGA TGGGTAAATT GGGAGGAAGA AGGTTGTTCC CCGTAGGTGA AGTTTGTATG AAATACGAAG GAGAACCCAA AGCCCACGAA TGGATCCAGA ATTTTGCTTC ACTCATGGTG GATGACGAGC CATTCTATAT AGATGAAGGA GAAGACGACA TTGATGACAG TGACAAGGAA GACAGCGAGG GAAATAGTGA TGATGCAGAC ACCCTTGTAG ACGTCGAAGA TATGGGAAAT ATAATAAGGA AATCTGGAAC GAAGGGATTG TCTGAAACTG AAACCAAAGA AATGGTAGCT AAAGATTCAC CCACTTACAA GTCCTTAACT AAGCAGGGGT ACACCATTGT AGGATCCCAT TCTGGAGTCA AAATCTGCAG ATGGACCAAG AGTGCCTTAA GAGGGAGAGG CTCTTGCTAT AAGTTTGCAT TCTACGGCAT CAAGTCACAT TTGTGTATGG AAACAACTCC TTCCCTTGCT TGTTCCAACA AGTGTGTCTT CTGCTGGAGA CACGGTACTA ACCCAGTAGC CAAACTGAAC TGGAGATGGG TATTGGATCC ACCAGAAAAG GTCATGGAAG GTGCCTTACA GGGCCACTAC CAGAAGATCA AACAGATGAG AGGTGTGCCT GGGATTCAAA TGGACAGATT CCAGGAAGCA TTCCAGGTCA AACACTGTGC ACTTTCTCTT GTGGGAGAAC CTATATTCTA CCCTCATATC AACGAATTCG TAGGTATGTT ACATGAAAAG CACATTTCCT CTTTTCTTGT TTGTAACGCT CAGCATCCAG ACAACCTTGC TAAGTTGTCT AAGGTGACGC AGTTGTACGT TAGTATAGAC GCGCCAACTA AGACCGACTT GAGAAAGGTA GATCGCCCTT TGAACAGTGA CTTCTGGGAA CGGTTGATGT CGTGCTTGGA TATCTTAAGA ACTGTCCAGA GTCACCAGCG TACTGTTTTC AGATTGACGT TAGTCAAGGG TTTCAACATG AACGACATTG AGAGTTACGC CGATATGGTT GAAAGAGCCC GTCCATCACA GATCGAAATT AAGGGTGCAA CTTTCTGTGG TTCTTCCACC GGAAACGGAA ATCCATTGAC TATGCAAAAC ATTCCATTCT ATGACGAGTG TAAGGAGTTT GTTATCAACT TGAGCAACGA ATTGCAATCC AGAGGCCTCA ACTATGATAT CGCTGCTGAG CATGCCCATT CCTGTTGTAT CTTGATGGCA GACACCAAGT TCAAGATCAA CGGAAAATGG CATACCCACA TCGACTATCC TAAGTTCTTT GAGCTTCTTG AAAGTGGAAA GGATTTTGTC GACTTGGACT ATGTTAGGGA GACGCCAGAT TGGGCTGTGT GGGGATCCGA CGAAGCTGGT TTCAATCCTG AAGACACTAA GTACGACAGA AAGACCGAAA AGTTGAAGAA GAAATTGGAG AGAGAGGAAC AGGCTAGAAA GGTCATTGAA CAGACAGAAT AACTAATTGT ACAGGGCATT ATAGATATGG AAAATATAAA TTACTACAAT
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Protein sequence | MGAGSGLLVV CGVVHAISGG RISLLSESPI YAVDFTSTSF TPSGTSVIPK REVRTTRAKR TPKVFKKAMP VKSIVEPTMT KSEVKLLESQ IYIFYTSLTG SSQRVATALK EKLEGLEDLQ NEPKLMSLDD DVDDLEEYFL KTPDNGATKN IYLLVLPSYE TDSPIDYFLE HLKDTYQDFR VDKYPMRTLL GFAILGLGDS ESWSGDKFCY QAKLADRWMG KLGGRRLFPV GEVCMKYEGE PKAHEWIQNF ASLMVDDEPF YIDEGEDDID DSDKEDSEGN SDDADTLVDV EDMGNIIRKS GTKGLSETET KEMVAKDSPT YKSLTKQGYT IVGSHSGVKI CRWTKSALRG RGSCYKFAFY GIKSHLCMET TPSLACSNKC VFCWRHGTNP VAKSNWRWVL DPPEKVMEGA LQGHYQKIKQ MRGVPGIQMD RFQEAFQVKH CALSLVGEPI FYPHINEFVG MLHEKHISSF LVCNAQHPDN LAKLSKVTQL YVSIDAPTKT DLRKVDRPLN SDFWERLMSC LDILRTVQSH QRTVFRLTLV KGFNMNDIES YADMVERARP SQIEIKGATF CGSSTGNGNP LTMQNIPFYD ECKEFVINLS NELQSRGLNY DIAAEHAHSC CILMADTKFK INGKWHTHID YPKFFELLES GKDFVDLDYV RETPDWAVWG SDEAGFNPED TKYDRKTEKL KKKLEREEQA RKVIEQTE
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