Gene PICST_67514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67514 
SymbolYPO7 
ID4838845 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp535780 
End bp538129 
Gene Length2350 bp 
Protein Length708 aa 
Translation table12 
GC content43% 
IMG OID640390160 
ProductFe-S oxidoreductase 
Protein accessionXP_001384062 
Protein GI150865016 
COG category[C] Energy production and conversion 
COG ID[COG0731] Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTCTCTAGT ACCATTATGG GGGCAGGATC AGGTTTATTA GTAGTTTGTG GAGTGGTCCA 
TGCTATTTCG GGTGGACGAA TCTCGCTCTT AGTAGCAGCC ATCGCACTCT ACATCTTGTA
TAATTTAGAG AAGAGTTCTA GATCCATCAG TTCCAAGAAT GAGCCACCAA ATCCAACCAA
AAAGTCGATT TTGAAGATGG TCACCAAGCC AAAATCGGCA GCAGATCAGA ATAAGGAATT
ACTGAAAAAG AGTGAATCTC CAATCTATGC AGTTGATTTC ACATCTACTT CCTTTACTCC
TAGTGGAACC TCTGTGATTC CTAAAAGAGA AGTCAGAACC ACCAGAGCAA AAAGAACTCC
CAAGGTGTTT AAAAAAGCCA TGCCAGTCAA GAGCATTGTC GAGCCAACTA TGACAAAGTC
AGAAGTGAAG CTTTTGGAGT CGCAAATCTA TATTTTCTAT ACTTCGTTAA CTGGCTCTTC
TCAGAGAGTA GCGACTGCTT TGAAAGAAAA GCTTGAAGGC TTGGAAGACT TGCAGAACGA
ACCCAAGTTG ATGAGTCTTG ATGATGATGT CGACGATCTT GAAGAATACT TCTTGAAAAC
TCCAGATAAC GGGGCTACCA AGAACATCTA CTTGTTGGTT TTGCCATCTT ATGAGACCGA
TTCTCCTATT GACTATTTCC TTGAGCATTT GAAGGATACT TACCAGGATT TCAGAGTCGA
CAAATACCCT ATGAGGACGT TATTGGGTTT TGCTATTTTG GGTTTGGGAG ACTCAGAATC
GTGGAGTGGA GACAAATTCT GCTATCAAGC CAAATTGGCT GATAGATGGA TGGGTAAATT
GGGAGGAAGA AGGTTGTTCC CCGTAGGTGA AGTTTGTATG AAATACGAAG GAGAACCCAA
AGCCCACGAA TGGATCCAGA ATTTTGCTTC ACTCATGGTG GATGACGAGC CATTCTATAT
AGATGAAGGA GAAGACGACA TTGATGACAG TGACAAGGAA GACAGCGAGG GAAATAGTGA
TGATGCAGAC ACCCTTGTAG ACGTCGAAGA TATGGGAAAT ATAATAAGGA AATCTGGAAC
GAAGGGATTG TCTGAAACTG AAACCAAAGA AATGGTAGCT AAAGATTCAC CCACTTACAA
GTCCTTAACT AAGCAGGGGT ACACCATTGT AGGATCCCAT TCTGGAGTCA AAATCTGCAG
ATGGACCAAG AGTGCCTTAA GAGGGAGAGG CTCTTGCTAT AAGTTTGCAT TCTACGGCAT
CAAGTCACAT TTGTGTATGG AAACAACTCC TTCCCTTGCT TGTTCCAACA AGTGTGTCTT
CTGCTGGAGA CACGGTACTA ACCCAGTAGC CAAACTGAAC TGGAGATGGG TATTGGATCC
ACCAGAAAAG GTCATGGAAG GTGCCTTACA GGGCCACTAC CAGAAGATCA AACAGATGAG
AGGTGTGCCT GGGATTCAAA TGGACAGATT CCAGGAAGCA TTCCAGGTCA AACACTGTGC
ACTTTCTCTT GTGGGAGAAC CTATATTCTA CCCTCATATC AACGAATTCG TAGGTATGTT
ACATGAAAAG CACATTTCCT CTTTTCTTGT TTGTAACGCT CAGCATCCAG ACAACCTTGC
TAAGTTGTCT AAGGTGACGC AGTTGTACGT TAGTATAGAC GCGCCAACTA AGACCGACTT
GAGAAAGGTA GATCGCCCTT TGAACAGTGA CTTCTGGGAA CGGTTGATGT CGTGCTTGGA
TATCTTAAGA ACTGTCCAGA GTCACCAGCG TACTGTTTTC AGATTGACGT TAGTCAAGGG
TTTCAACATG AACGACATTG AGAGTTACGC CGATATGGTT GAAAGAGCCC GTCCATCACA
GATCGAAATT AAGGGTGCAA CTTTCTGTGG TTCTTCCACC GGAAACGGAA ATCCATTGAC
TATGCAAAAC ATTCCATTCT ATGACGAGTG TAAGGAGTTT GTTATCAACT TGAGCAACGA
ATTGCAATCC AGAGGCCTCA ACTATGATAT CGCTGCTGAG CATGCCCATT CCTGTTGTAT
CTTGATGGCA GACACCAAGT TCAAGATCAA CGGAAAATGG CATACCCACA TCGACTATCC
TAAGTTCTTT GAGCTTCTTG AAAGTGGAAA GGATTTTGTC GACTTGGACT ATGTTAGGGA
GACGCCAGAT TGGGCTGTGT GGGGATCCGA CGAAGCTGGT TTCAATCCTG AAGACACTAA
GTACGACAGA AAGACCGAAA AGTTGAAGAA GAAATTGGAG AGAGAGGAAC AGGCTAGAAA
GGTCATTGAA CAGACAGAAT AACTAATTGT ACAGGGCATT ATAGATATGG AAAATATAAA
TTACTACAAT
 
Protein sequence
MGAGSGLLVV CGVVHAISGG RISLLSESPI YAVDFTSTSF TPSGTSVIPK REVRTTRAKR 
TPKVFKKAMP VKSIVEPTMT KSEVKLLESQ IYIFYTSLTG SSQRVATALK EKLEGLEDLQ
NEPKLMSLDD DVDDLEEYFL KTPDNGATKN IYLLVLPSYE TDSPIDYFLE HLKDTYQDFR
VDKYPMRTLL GFAILGLGDS ESWSGDKFCY QAKLADRWMG KLGGRRLFPV GEVCMKYEGE
PKAHEWIQNF ASLMVDDEPF YIDEGEDDID DSDKEDSEGN SDDADTLVDV EDMGNIIRKS
GTKGLSETET KEMVAKDSPT YKSLTKQGYT IVGSHSGVKI CRWTKSALRG RGSCYKFAFY
GIKSHLCMET TPSLACSNKC VFCWRHGTNP VAKSNWRWVL DPPEKVMEGA LQGHYQKIKQ
MRGVPGIQMD RFQEAFQVKH CALSLVGEPI FYPHINEFVG MLHEKHISSF LVCNAQHPDN
LAKLSKVTQL YVSIDAPTKT DLRKVDRPLN SDFWERLMSC LDILRTVQSH QRTVFRLTLV
KGFNMNDIES YADMVERARP SQIEIKGATF CGSSTGNGNP LTMQNIPFYD ECKEFVINLS
NELQSRGLNY DIAAEHAHSC CILMADTKFK INGKWHTHID YPKFFELLES GKDFVDLDYV
RETPDWAVWG SDEAGFNPED TKYDRKTEKL KKKLEREEQA RKVIEQTE