Gene PICST_67505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67505 
SymbolCBP3 
ID4838925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp501420 
End bp502531 
Gene Length1112 bp 
Protein Length332 aa 
Translation table12 
GC content42% 
IMG OID640390240 
ProductProtein required for assembly of ubiquinol cytochrome-c reductase complex (cytochrome bc1 complex) 
Protein accessionXP_001384057 
Protein GI150865011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.441629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGAA GAAACGTTGC TCGATACGCC TCAGGAGGTC ACAGAAATGT CAGAGCCATT 
TCTACCTCTC AAATATTGGC ATTTGGAGCC AGAAACAGTG CCATATTGAA CAGGTTCAAA
AATGAAGAAA TCGAAGCACC TTCCAAATTG GCCCAGGAGT CCAGTTTGCC TGTGATTGAA
CAGGATTTAA AGACAAAGCC TCGTCATCCA AGTAAGAAGA TTCCATTTCT TTCAGATCAC
AAGATCGAGA ATGACCCCAA CTACCAAATG TCGGGCTGGA AGCAATCGAT TGGCCAATGG
GTCATCAAAA CTTTCCTGAT TGATATGGAC AAATCCCGTG CTGGGCCCGT TGCTGGCTCC
ATTTACTTTG GAGAATGCAA GAGACAAGGA TTATACTATC CAAATGAGCC TCTTTCCGAT
ACTGCTAGTT TCTTCTACGA GACTTTGAAT TTACCCAAGT CGTTTTCTCA GCAGTACCAA
ATTGCTTTGC TTCACTACTG GATTTTGTCG GTAAGAATGA GAGCCATGCC TTTCAAGTAC
GGCAAGAACT ACCAGCAGAA GTTGATCGAT AGAATGTTCA AGGATATGGA ATTGAGAATG
TCCCAGGAGT TGAAGATTCT GTCCAACAGA ATCATAGAAA ACTATTTGAA AGATTACCAC
ACCCAGTTGA TTGGTGCCGT TTTAAGTTAC GATGAAGGGT TGATGACCGA TGATATCACA
TTGGCTTCCG CCTTATGGAG AAACGTGTTC AACGGTAACC CCAACGTAGA CATGAGACAC
GTAGAGGCCT TGTTAGGCTA TGTCAGATCT CAATTATATG TGTTGAACAA GATGTCTGAC
AGAGAATTCG GTTTCGGTAA GTTCAAATTC GTTCCACCTG ACCAGGTTGT CCAGCCTTTG
ACCAAAGCAC AAGAAGCTGA TTTGAAAGAA AAAGCCAAGG CTGAGTTCGC GCAACATACC
TTACCTTCTC AAACAAGTAG CTTGTCTTTG GATGAGTAAA CAACATTCAA ACAATTCATA
TACATAGTTC CACACAAACT ACATGTACAT ATACTAGCAA TGGAATGAAT AGATATTGTT
AACATAAATA AATACACGTA AACATAGACC AC
 
Protein sequence
MLGRNVARYA SGGHRNVRAI STSQILAFGA RNSAILNRFK NEEIEAPSKL AQESSLPVIE 
QDLKTKPRHP SKKIPFLSDH KIENDPNYQM SGWKQSIGQW VIKTFSIDMD KSRAGPVAGS
IYFGECKRQG LYYPNEPLSD TASFFYETLN LPKSFSQQYQ IALLHYWILS VRMRAMPFKY
GKNYQQKLID RMFKDMELRM SQELKISSNR IIENYLKDYH TQLIGAVLSY DEGLMTDDIT
LASALWRNVF NGNPNVDMRH VEALLGYVRS QLYVLNKMSD REFGFGKFKF VPPDQVVQPL
TKAQEADLKE KAKAEFAQHT LPSQTSSLSL DE