| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59609 |
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| Symbol | RIS1 |
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| ID | 4839040 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 141241 |
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| End bp | 143511 |
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| Gene Length | 2271 bp |
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| Protein Length | 715 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390355 |
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| Product | SNF2 family DNA-dependent ATPase |
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| Protein accession | XP_001384327 |
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| Protein GI | 150865205 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.561177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.329781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATCTGAAGG ATCTTCAAAA TTTATTGGAC AACATTAAAC CAGACGAAGA TTTGGAAGAA
GGAATAGAAC CTACTCCCAA GGAGCTTTCA ATCAACTTGA TGAAGCACCA AAGGTTGGGT
TTAACTTGGT TACTTCGAAT GGAGAATTCC AAAGCGAAGG GGGGTATTCT TGCTGATGAT
ATGGGTCTTG GTAAGACAGT TCAAACTTTG GCTTTATTGA TGGCTAACAA ATCAAAGGAT
CCTACTAGAA AGACGACCTT GATCATTGCA CCGGTTTCCT TGTTGAGACA GTGGGATGCT
GAAATCGAGT CCAAGGTGAA GGCTGATATT CAAGTCAAAG TAGCCATTTA CCATGGCAAT
GATAAGAAGC AATTGTCTAC TTTCAAGGAC TTAGCTCAAT ACGATGTCAT CATGACTTCG
TATGGAACAT TGTCTTCAGA ATGGAAAAAA CATTTCAGCG AAGTGATTAC TGGAGTAAAT
AAGAAAAAGA GCAACTATCT ACCTCATCAT GGTGAAGGAG GTAGAAGTTA TGTTTCTCCG
TTTTTTTCCA AGGAAGCCTT TTTTTATCGA ATCATCCTAG ATGAAGCTCA GAATATTAAG
AACAAGTTGT CTCTTGCTTC CAGAGCTGTC ACTCTCTTAC GGGCAGATTA TAGATTCTGC
TTGTCTGGTA CTCCTATGCA AAACAATGTC GAAGAGCTTT ACCCCATCAT TCGTTTCCTA
CAGATACGGC CATATAACGA GGAGCAGAGG TTTCGCGTGG ATATTGCTAT CCCATTGAAA
TCAAAAAACA GAGAGTATGA TGACTATGAT AAAACGCAAA GTATGAAGAA GTTGAGAGCT
ATTTTGAAAG CAATTTTGCT TCGGAGATCC AAGACTACCT TGATTGACGG AAAGCCGATC
TTGTCGCTTC CGGAGAAACA TTTGATTTCT GATTTTGTCG AACTCGATAC CGAGGAACAA
GAGTTCTATA ATTCTTTAGA ATCTGGTATC AAGAAAAAAG CAAAGAAAAT CATGCTGCAA
CAGAAAAGAA TGGGCATGGC TTCTGGAATC TTGACTCTTT TACTTCGTTT GAGACAAGCA
TGTTGCCACA ACTATTTGGT TGAAATCGGG GAGATTAAAG CTAAAGATAG GAAGAGCGAC
CTGGGTAAGA AAAGAATAAT AGATTGGAGA TTCATGTTAC GACAACTAGC CACGTTAGAT
GCTAGTGTGA TATCGCGAAT TAAACATCTT GATCATGCGT ACTCTGGCGG AGTTTCCAAG
AAGATTATCA AGAATGATTC TAATGAGATT GGCGGGCCCA AAATCGAATC AAATGACTTC
TTGGAGTCTT TAGTTGAAGA TTCCGATAAT GAAGATAATA GTAACGATCC CCCCGATAAC
GATGAAGATA ACATGTTCAC TTGTCCTATT TGCTACAGTG TTGTTAACAA TTTGGAAGAT
ACGTTAATCT TTCCAAATTG CGGACACATG ATTTGTCTGT CATGTGAAGA AGTTTTCTTT
GAGGACCAAT TGGAAGATGA TAGTGGCGAA TCTAACGTCG CTCGTTGTAA GGAATGCGGA
ACAAAGGTGA AACAATCTAC TTTAATAGAC TATATGATAT TCAAACTTGT TCATCATGAT
CAAATGGAGT TGCCTGAGAT AGCAAGCTTT TGTACTCGTT ACTATGCAAT TTCGAAAACG
CCTACAAACA TGCAGCTTGT TCAGCAATTG GTCAAGAGGG ACAACGGATT GACTCCTTCG
GCCAAGATTT CCAAATGTGT AGAACTATTA AGGGAGATTT TCAAGTCATA CCCAGGAGAA
AAAATTATAG TCTTTTCTCA GTTCACCAGT TTATTTGACA TCATGAAGTT GGTTTTAGAT
AAAGAAGAGA TCGACTTCTT GAGGTATGAT GGATCCATGA CAATTGACCA TAAGAATTCT
ACTATCAAGA GGTTCTACCA GGAAGATGTC AAGGTATTGT TGTTGTCGTT AAAGGCTGGT
AATGTAGGTT TGACTTTGAC ATGTGCATCT CATGTGATTA TCATAGATCC GTTTTGGAAC
CCATATGTTG AGGAGCAGGC TATGGATAGA GCTCATAGAA TTGGGCAGGA ACGAGAAGTA
TTTGTTCACA GAATCTTAAT TGCCGGTACT GTCGAGAGTA GAATCATGGA GTTGCAAGAT
AGGAAACGAG AAATGGTGGG TGCGGCATTA GACGAGAAGG GCATGAAGTC TGTGTCTAGA
CTTGGCCAAA AGGAATTGGG TTTCTTGTTC GGCTTGAACA GCTTGACATA G
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| Protein sequence | DSKDLQNLLD NIKPDEDLEE GIEPTPKELS INLMKHQRLG LTWLLRMENS KAKGGILADD
MGLGKTVQTL ALLMANKSKD PTRKTTLIIA PVSLLRQWDA EIESKVKADI QVKVAIYHGN
DKKQLSTFKD LAQYDVIMTS YGTLSSEWKK HFSEVITGVN KKKSNYLPHH GEGGRSYVSP
FFSKEAFFYR IILDEAQNIK NKLSLASRAV TLLRADYRFC LSGTPMQNNV EELYPIIRFL
QIRPYNEEQR FRVDIAIPLK SKNREYDDYD KTQSMKKLRA ILKAILLRRS KTTLIDGKPI
LSLPEKHLIS DFVELDTEEQ EFYNSLESGI KKKAKKIMSQ QKRMGMASGI LTLLLRLRQA
CCHNYLVEIG EIKAKDRKSD SGKKRIIDWR FMLRQLATLD ASVISRIKHL DHANDPPDND
EDNMFTCPIC YSVVNNLEDT LIFPNCGHMI CSSCEEVFFE DQLEDDSGES NVARCKECGT
KVKQSTLIDY MIFKLVHHDQ MELPEIASFC TRYYAISKTP TNMQLVQQLV KRDNGLTPSA
KISKCVELLR EIFKSYPGEK IIVFSQFTSL FDIMKLVLDK EEIDFLRYDG SMTIDHKNST
IKRFYQEDVK VLLLSLKAGN VGLTLTCASH VIIIDPFWNP YVEEQAMDRA HRIGQEREVF
VHRILIAGTV ESRIMELQDR KREMVGAALD EKGMKSVSRL GQKELGFLFG LNSLT
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