| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59604 |
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| Symbol | |
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| ID | 4838582 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 172278 |
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| End bp | 175460 |
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| Gene Length | 3183 bp |
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| Protein Length | 1052 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389897 |
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| Product | predicted protein |
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| Protein accession | XP_001384332 |
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| Protein GI | 150865209 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5656] Importin, protein involved in nuclear import |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.487702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.194041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA ACGTGTTGTT GGAGTGTTTC TCTGCGACGC TCCAGGCAAA CCAGGATGTC
CGGATACAAG CGGAGGTCAA GCTTCGTGAA TTGAGTGCTA CACCTGGTTT TTTGGGTGCA
TGTTTAGATA TCATAGCTTC TAACGGTAGC TCGATCAATT CAGGAGTCCG TAAGGCTGTA
GCTGTGTACT TCAAAAACCG TGTAGTCAAG TTTTGGACCT CGGCTGATTC CAAGATTGAT
GCTGGTGAAA AGCCGGTGAT TAAAGACCGG ATCTTGCCAG TCATTGTAGT GTCTGACTAT
ATCACCAAAC AACAATTGAT ACCTGTCTTG AGAGTATTGA TTTCTCATGA GTTTCCCAAC
TGGTCTGGTC TTTTGGAACT GACGGGTTCG CTTTTGCAGC AAGTTCCTAC TGGTTCAAAC
GTGAAGGATG AGGACTTTTC ACAGTTGTAC ACTGGCTTAT TGTGTTTTGC TGAAATATCA
CGAAAGTTCA GATGGACCGA TAACAACGAC AGAAAAGCCG AGCTTTATCC TATAATCGAA
CTGGCTTTCC CTCACTTATT AAATATTGGC AATACCATCG TGGCTTCTGC CCAGAATATC
ACGGAGTTCC AGGCGGAAAT CGTAAAGTTG ATTCTTAAGA TCTACAAATT CGTCACTTAC
TACGACTTGC CTGCTCCCTT GCAAACCTCA GAAGCCGTCG AGCAATGGGG TCAATTCCAT
GAATCCGTCA TCAATATGCC GGTGCCACTG TATATCCGCG ACTCCAACCT TAGCGAACAG
GAAAAGTCCT TTCTCCAGTT CTCCAAGTGC TACAAATGGT CTATCGCTAA TATGTACCGT
TTATTTGTTC GCTATGCATC GGCTAGCTTG GGTAAAAAAT TCAAATATAC TGAATTTCAC
GAGTTGTACT TGAACCAACT CGTGCCTCCT TTGTTATCCT CATACCTTTC TATTATTGAA
CAGTGGTGCC AGGGTAAGAA GTGGTTGAGT TCTTCAGCCC TTTACTTTCT CTTAGAGTAC
TTGAGTCATT GCATTACCCA AAAGTCCACT TGGCAAATCA TCAAGCCCTT CTTCCAGAAT
CTCGTCTCAT ACTTAATCTA CCCATTGTTG TGCCCTAGCG ACAGCATCTT GGAGATATTC
GAATTGGATC CCCAGGAGTA TATCCATGTA GCCTTTGATA TATCCGAAGA GTTCAACAGC
CCCGATGTTG CTGCTTTGGG TTTGTTGGTG ACTCTTGTAC ACAAGAAAAA ATCTACTACG
TTGGAAACTA TAGTCTCTGT CATTCACCAA GAATTGAACC AATTACAACA CCAAGAGGAA
ACTCTAGAGG TTGCTAAAAA GAAGGAAGGT GCCTTGAGAA TGCTAGGAGG CATTTCATCT
TATCTTACAG CTGCTAAATC AGACTACAGA AGTCAAATGG AAGCTTTCTT GATTCACTTG
GTATTCCCTT CACTCACATC TAAGTTTGAA TTCTTGAGGG CCCGTGCACT TGAAGTGGTT
TCAAAGTTCG ATGACATTAA TTTGCAAGAG GAGCAGAGTA AGTCAATGTT GTACCAAGGT
GTTCTCAGAA ACTTTGACTC TTCGAGCAAC GCCAGTTTAC CTGTCAGTTT CCAAAGCGCT
TTGGCAATAC AAGCTTTCTT GCCCCAGCCG CAATTCAAGG AAATTTTGTC TGGAATTATA
ATACCGACCA TGTCAAGATT GTTGGAGTTA TCTAACGACA TCGACAATGA CGCTATTTCC
ATTGTAATGC AGGAATGTGT TGAAAATTTC TCGGAACAAT TGCAACCTTT CGGGGTTGAT
TTAATGAGCA AGTTAGTGGA ACAATTCATG AGGTTGGCTG TGGAAATTAA TGAAGCATCG
AACGTCGATG TGGATGATTT TGACGGAAAT TTTGAAGACC AGAGTGAAAA GGTCATGGCC
GCCATTGGTT TACTCAACAC CATGATCACT GTTTTATTGT CCTTCGAAAA CTCTACTGAA
GTATGCTTGA AGCTAGAGGA AGTCTTCTCA CCAGCCATTA CTTACGTGTT GACAAACAAG
ATTGATGATT TCCTCGCTGA AATTGGGGAG TTGATGGAAA ATTCAACATT CTTGTTACGT
TCCATCAGTC CTATTATGTG GAAGAATTTT GAGCTTTTGA GTGATTCGTT TGCTGATGGT
CTTGCTATAA TGTACCTTGA AGAACTAATG CAGTGCTTGC AAAATTTTTT GAACTACGGA
ACTGATGAAT TAATCAAGAA CCCAGCTCTT GTTCAAAAAT TTTTCAATAT TTATAAGATG
ATTTCAGAAG GTGAGGATAC CCAAATTGGA TACAACGATC TTGTGTTTGC TTGCGAATTA
TCGCAAACCT TCGTTTTATC TTTACAGCAA GTTTCTGTTC AATACATTCC TAGTTTTGTT
CGATCTGTCA TCACTATCTC TAACGAAGGG AACAAGGATA AACACCATAT CAAGAACAGT
GCATTTGATG TAAATGTCAA CAATGTTATT GCTGCTTGTT TGGTTTACGA TGCCCCAACT
ACTTTGAGCA TATTGCAAGA ATCTAACCAA GTGATTCCAT TCTTTGAACG TTGGTTCCAG
TTGATCCCTC AGTTGAAGCG TGTTTACGAT TTAAAATTGT CCATACTTGC ATTGTTGAGC
TTGTTGAACA ACGAAGAAAT TATCTCACTG TTACATTCTA CTACTCCAGC TATATTTGAC
CAAATGGGAT TAAAATTAGC TATATTAACG AGAGAATTGC CAAAGGCAGT CGAGAGTTTA
GAGAAGAGAA GGAAGAATTT CGACGAAAGT GATTTCGGAG GTGACAACTA TAGATACGGC
GACGACGAAT GGGAAAATGC CAGCTCTGAA GATTTAGACT ACATTCTCGA CCAGGGAGAA
GCAGCAGCAA ATGAAGCAGC CAATGAAGAA GAGGTCGAAG GAGGTAGACA CGAGTACTTA
AACTTTTTAC AGGAAGAGGA TAATAAATTG AAGAGTTCAG GTTACTTCGA TGAAGAAGAT
GAGCCAGTGA TAGAGGACCC ATTGGCCACA ACCCCCCTTG ATAGCGTCAA CGTTTTTGCG
TTGCTAAAGG ATTTTATGGT CAAGGTGGAA GCCAATAATG CTGCTCTTTT CAGCGGTATT
TTTGGAGGTC TTACTGAAAG TGACAAGATA CTCTTTAAAG ATATTTTTGA TATTGTTCAG
TAG
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| Protein sequence | MNANVLLECF SATLQANQDV RIQAEVKLRE LSATPGFLGA CLDIIASNGS SINSGVRKAV
AVYFKNRVVK FWTSADSKID AGEKPVIKDR ILPVIVVSDY ITKQQLIPVL RVLISHEFPN
WSGLLESTGS LLQQDEDFSQ LYTGLLCFAE ISRKFRWTDN NDRKAELYPI IESAFPHLLN
IGNTIVASAQ NITEFQAEIV KLILKIYKFV TYYDLPAPLQ TSEAVEQWGQ FHESVINMPV
PSYIRDSNLS EQEKSFLQFS KCYKWSIANM YRLFVRYASA SLGKKFKYTE FHELYLNQLV
PPLLSSYLSI IEQWCQGKKW LSSSALYFLL EYLSHCITQK STWQIIKPFF QNLVSYLIYP
LLCPSDSILE IFELDPQEYI HVAFDISEEF NSPDVAALGL LVTLVHKKKS TTLETIVSVI
HQELNQLQHQ EETLEVAKKK EGALRMLGGI SSYLTAAKSD YRSQMEAFLI HLVFPSLTSK
FEFLRARALE VVSKFDDINL QEEQSKSMLY QGVLRNFDSS SNASLPVSFQ SALAIQAFLP
QPQFKEILSG IIIPTMSRLL ELSNDIDNDA ISIVMQECVE NFSEQLQPFG VDLMSKLVEQ
FMRLAVEINE ASNVDVDDFD GNFEDQSEKV MAAIGLLNTM ITVLLSFENS TEVCLKLEEV
FSPAITYVLT NKIDDFLAEI GELMENSTFL LRSISPIMWK NFELLSDSFA DGLAIMYLEE
LMQCLQNFLN YGTDELIKNP ALVQKFFNIY KMISEGEDTQ IGYNDLVFAC ELSQTFVLSL
QQVSVQYIPS FVRSVITISN EGNKDKHHIK NSAFDVNVNN VIAACLVYDA PTTLSILQES
NQVIPFFERW FQLIPQLKRV YDLKLSILAL LSLLNNEEII SSLHSTTPAI FDQMGLKLAI
LTRELPKAVE SLEKRRKNFD ESDFGGDNYR YGDDEWENAS SEDLDYILDQ GEAAANEAAN
EEEVEGGRHE YLNFLQEEDN KLKSSGYFDE EDEPVIEDPL ATTPLDSVNV FALLKDFMVK
VEANNAALFS GIFGGLTESD KILFKDIFDI VQ
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