Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59512 |
Symbol | |
ID | 4838434 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1204829 |
End bp | 1205665 |
Gene Length | 837 bp |
Protein Length | 266 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389749 |
Product | predicted protein |
Protein accession | XP_001384185 |
Protein GI | 150865105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.341632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0395288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTCAC CGCCTGCGTA TGCTCCCACC ACCGCCACAT CCTTCACGAT CTCTTCACTT AACGATGCCA AATACCACGA AGAAGTAACC AAGTCATCGT TAATAAAGTC TTCCATTCAC AAATCAACAT ATGATGCACT TGCAGAGATC TTCTCCATAC TTCCAACTTT GGATATGTTG GAGAACTCGT ATGTTAAAGA TTACATCACA GACAAAGAAA AGTTCACCAA GACTTCTTAC AGACTCATAC ACCAGTACCA GATCATCGTC AAAGGCTTCT TGGACGACAC ACAAAAGCTA GAGATGCTCC GTGAAGTTCT TGCCATGCCA GACTTGCTGG ACGATTTGTC AAATTTCTTA CCTCGTTTCG CTGATAAGTT CAATCTCAAT ACTCCGAAAG CCATAAAACG TCTTCAAGTA GGTATACCAG CCACCATAGA ACAGATGAGT AGTCAAGTAG ACAGCTCCAG CCATCCAGGA ACAACCGGAC TTGCCAGCAT AGGAACAACC ACTATCCCTA CATCTTCCAG CGCCACTTTA CTTGTACAGA TCACAGCCAA CTTTCTCACT GTTATGGATG CCTTGAAGTT GAACTACAGG ACTAAAGAAC AATTGCATCC GCTTCTAAGC GATTTGGTGG TCAATCTCAA CGACTTGGTA GAAAATGGTA ACCACAAGGA GTTTGATTTC CAAGGAAAAT CAAAGTTGAT CACATGGTTG ATCAAGTTGA ATAATTTGGG TGACAGCCAG GAGTTGTCAA GCGAAGATGC TGATTCGTTC TTTGAGGATT TGGATTCGGG ATACAAGGCA TTCTATGATT CGTTAGAGCA TTTGTAG
|
Protein sequence | MNSPPAYAPT TATSFTISSL NDAKYHEEVT KSSLIKSSIH KSTYDALAEI FSILPTLDML ENSYVKDYIT DKEKFTKTSY RLIHQYQIIM LREVLAMPDL SDDLSNFLPR FADKFNLNTP KAIKRLQVGI PATIEQMSSQ VDSSSHPGTT GLASIGTTTI PTSSSATLLV QITANFLTVM DALKLNYRTK EQLHPLLSDL VVNLNDLVEN GNHKEFDFQG KSKLITWLIK LNNLGDSQEL SSEDADSFFE DLDSGYKAFY DSLEHL
|
| |