Gene PICST_59512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59512 
Symbol 
ID4838434 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1204829 
End bp1205665 
Gene Length837 bp 
Protein Length266 aa 
Translation table12 
GC content43% 
IMG OID640389749 
Productpredicted protein 
Protein accessionXP_001384185 
Protein GI150865105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.341632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0395288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAC CGCCTGCGTA TGCTCCCACC ACCGCCACAT CCTTCACGAT CTCTTCACTT 
AACGATGCCA AATACCACGA AGAAGTAACC AAGTCATCGT TAATAAAGTC TTCCATTCAC
AAATCAACAT ATGATGCACT TGCAGAGATC TTCTCCATAC TTCCAACTTT GGATATGTTG
GAGAACTCGT ATGTTAAAGA TTACATCACA GACAAAGAAA AGTTCACCAA GACTTCTTAC
AGACTCATAC ACCAGTACCA GATCATCGTC AAAGGCTTCT TGGACGACAC ACAAAAGCTA
GAGATGCTCC GTGAAGTTCT TGCCATGCCA GACTTGCTGG ACGATTTGTC AAATTTCTTA
CCTCGTTTCG CTGATAAGTT CAATCTCAAT ACTCCGAAAG CCATAAAACG TCTTCAAGTA
GGTATACCAG CCACCATAGA ACAGATGAGT AGTCAAGTAG ACAGCTCCAG CCATCCAGGA
ACAACCGGAC TTGCCAGCAT AGGAACAACC ACTATCCCTA CATCTTCCAG CGCCACTTTA
CTTGTACAGA TCACAGCCAA CTTTCTCACT GTTATGGATG CCTTGAAGTT GAACTACAGG
ACTAAAGAAC AATTGCATCC GCTTCTAAGC GATTTGGTGG TCAATCTCAA CGACTTGGTA
GAAAATGGTA ACCACAAGGA GTTTGATTTC CAAGGAAAAT CAAAGTTGAT CACATGGTTG
ATCAAGTTGA ATAATTTGGG TGACAGCCAG GAGTTGTCAA GCGAAGATGC TGATTCGTTC
TTTGAGGATT TGGATTCGGG ATACAAGGCA TTCTATGATT CGTTAGAGCA TTTGTAG
 
Protein sequence
MNSPPAYAPT TATSFTISSL NDAKYHEEVT KSSLIKSSIH KSTYDALAEI FSILPTLDML 
ENSYVKDYIT DKEKFTKTSY RLIHQYQIIM LREVLAMPDL SDDLSNFLPR FADKFNLNTP
KAIKRLQVGI PATIEQMSSQ VDSSSHPGTT GLASIGTTTI PTSSSATLLV QITANFLTVM
DALKLNYRTK EQLHPLLSDL VVNLNDLVEN GNHKEFDFQG KSKLITWLIK LNNLGDSQEL
SSEDADSFFE DLDSGYKAFY DSLEHL