| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59469 |
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| Symbol | |
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| ID | 4838552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 831762 |
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| End bp | 833867 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389867 |
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| Product | predicted protein |
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| Protein accession | XP_001384460 |
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| Protein GI | 150865304 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain
[COG5533] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.185317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTA GCTTAAACAA GAGTACTAGC AGCGGGTCCA AGGAGTTTAA CCCTGTACTC
GATAGATATC TTTCGCATCC GCTCACTTTT AAGCCCGGAA GACAGATGGA TGCCAACACC
AGTACCGAGG GCAAGCCAGG CAATTATATA ATTCTCTCGC GCAAGAAGAA GACTTTGGCC
AGCGGAGGAA GCATAGCGAT TAACGGAAGC AGTTCTCCAA CTTCTGCTAC CACTTCCCCG
AAGTCTTTAG CGAAAGCTAC ACACAAGCCG AGGTCTATGG CTGAGGCTGT AGCTGCGTAT
ACTGGTAAGA AGTTTCTTAC TAAGGCAGAG AAAAAACAGT TATCAAGAAA GAGGAAGCTA
GAAGAGGCGG AAGAAAAACG TCAAGTGAAT CAAGATGCTA ATACTACTTC ATCTGCATCT
ACATCGATCA TCAAGAATAT TTTCAGCATT TATAACCGAA CTGCCAGCTC TCAGAATGAG
GATTTGGGTG AGAATGTGAC GTCCGATAAC GATTCACAGT ATGAATCGGC TTCTGAAGTG
TTTGAAGAAA CAAGCAACAA TAATACCGAG AGCGAGAGTC CTTTCACAGG TTTCAGTGAG
TCTGAGTCCA AGAGCGGAAC TCCTGGTGCT GAAGATAAGA ATGATGTAGA TGAAGAAGAA
GAAGATGAAG AAGACGACGA TTTCAATAAT TCCAGTTCCT CTTCTAGTTC ATCCGTGGAA
GATTCGTCTA GGTCGACTAC TCCTTCTGAA GAAGATGAAG ACGAGGATAA AGACCTTGAG
AAGTTGAAGT ATGACTTAAA AACGGATCAG CTTGAGAATC AGAAACAGAA AGACGAAGAC
TATGAAGAAG AAGATGAAGA CGACGAAGAA GAAGATTTGG AAGATGAAGA GAAGCTGAAA
CAGCAGTCGA AAGAGTCATC TACACCACCG ACTTCACCTG AGGAGGACAA CGATGAAGAG
AAACAGCTTC AGTTCTACGA TATGGGAGAG GACCCTTCTG ATCGAGGTTC AAACCACAGC
AAGCGTATAT ACAAGAACTG GCGGGAGTTG GAAAACAAGA AGCCTGTAGG GTTATTGAAC
CATGGCGTGA CTTGTTACAT GAACTCAGCC ATCCAAGCCA TGGTTCACAT TCCTGCTATT
CAGCATTATC TCAACGCTAT CAACCACAAC AAGGTCTCGG AGTTGAAGCC TCGTTCAGTG
AGCCATGTGT TGGCTGACTT GAGTCGTCGT ATGTGGGCTC TAGATGGCAC TAAGCATGTC
AAGTACGTCA ACCCCAAGAA GATCATCCAA CGTTTAGGTG ATATCAACTG TATGATGAGC
GAATGGCAGC AGGAAGATGC CCATGAGTAC TTTATGTCGT TGATGTCACG TTTGCAAGAA
GACCTGACAC CCAAGGGAGT CAAGATGAAC CAGTCTATCA TATATGACAT CTTTGGAGGG
TTACTCGCAC AGAGAATCAC ATGTACCAAA TGTAACAATG TTTCGGAAAC GAAGCAGGAG
TTCTACGACT TGCTGTTAGG GCTCAATAAG AAGAAACTCA GAGACCACCA GCCTATAGAT
GACTCAATTC CCAGCTCCAA TCGTTATCTG ATTGAGAAGT CGGTCCGCGA TTTCTTCAGT
AACGAATTGA TCAAGATCGA CAAGGCAGAC AGCAAACTGG GCTACTTCTG CGAGAAGTGC
CAGGACCGTA CTGTAGCACA TAAGATATCA TTTATAGACA GATCGCCAGA GTATTTGACG
GTGCATCTCA AGCGTTTCAA GTTCAACGGC AACTCGTCGC TGAAGGTGAA GCAGTCCATC
AGCTATAGCG ATGTTCTAGA CTTGACTCGG TACACTGTGG ATGCGCGTCA TGCTGCGAAG
TACAAGTTGA TGGCAGTGAT AGTTCACGAG GGTAGATCCA TCTCTAGTGG ACACTATATT
GCTCATTGTC TTCAGCCAGA CGGCAGTTGG GCCACGTATG ACGACGAGTA CATCAACAAG
ATTGATGCAA GAATAGCTTT GGCCGATCCG TCGGCTTATG TGTTGGTGTA TTCGAAGTTG
ACACCGAAGG ATTTAAAGAG AAATGGGGAT GGTATTGAAA GTGAGGCAAA GAGAAGAAAG
ATATAG
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| Protein sequence | MAASLNKSTS SGSKEFNPVL DRYLSHPLTF KPGRQMDANT STEGKPGNYI ILSRKKKTLA
SGGSIAINGS SSPTSATTSP KSLAKATHKP RSMAEAVAAY TGKKFLTKAE KKQLSRKRKL
EEAEEKRQVN QDANTTSSAS TSIIKNIFSI YNRTASSQNE DLGENVTSDN DSQYESASEV
FEETSNNNTE SESPFTGFSE SESKSGTPGA EDKNDVDEEE EDEEDDDFNN SSSSSSSSVE
DSSRSTTPSE EDEDEDKDLE KLKYDLKTDQ LENQKQKDED YEEEDEDDEE EDLEDEEKSK
QQSKESSTPP TSPEEDNDEE KQLQFYDMGE DPSDRGSNHS KRIYKNWREL ENKKPVGLLN
HGVTCYMNSA IQAMVHIPAI QHYLNAINHN KVSELKPRSV SHVLADLSRR MWALDGTKHV
KYVNPKKIIQ RLGDINCMMS EWQQEDAHEY FMSLMSRLQE DSTPKGVKMN QSIIYDIFGG
LLAQRITCTK CNNVSETKQE FYDLSLGLNK KKLRDHQPID DSIPSSNRYS IEKSVRDFFS
NELIKIDKAD SKSGYFCEKC QDRTVAHKIS FIDRSPEYLT VHLKRFKFNG NSSSKVKQSI
SYSDVLDLTR YTVDARHAAK YKLMAVIVHE GRSISSGHYI AHCLQPDGSW ATYDDEYINK
IDARIALADP SAYVLVYSKL TPKDLKRNGD GIESEAKRRK I
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