| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59466 |
|---|
| Symbol | |
|---|
| ID | 4838593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 64314 |
|---|
| End bp | 66401 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640389908 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384311 |
|---|
| Protein GI | 150865194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATC AACATAGTCG ACCTACCCAG CGACGGAACC TCGGTTCTCC TTTCAAATCA
CCAGAAGCCA TAGCGAAAAT GTCCAAGTCT CAGAACCTGA ACATGACTAC CTCCTCAACA
CTACAGACTC CAGACAATGT CAAGTCAGTC CAGTACGAAG CGAGTCCGAC TCCCGTCAGA
CATACCGCAG TTAAATCACT AGCGCCCCTG TCTCAATATG AGGAAGTCCC TGTTGCTGAT
CCGACCAAAC AGACTGATTC TCTCACATGT CCTATATGTT CAGAGCATAT GCTAACATTA
TCACAATTGA ACCAACATAT CGATGATGCT CACCAGGAAA AAGAGATGGA AACTGATAGT
TCCAATGCTG CCAATAATCT CAGCAACGGC GGAACCTCAG TTGGGCGACT TTTAGGTACA
AACGATGTGA AACGGTGGTT TTCTGGAAAA GTCATAATTG ACCCTGTGCC AGATTTTGAG
TCTGAAAATC AACGCAAGAC TCCTCAAAAA CGAAAAACTA TCTCTCTAGA TATGCTCGAT
GATGAACGAG GATTCAGTTT CTCCGACAAT GGTGATGGAT TCCGCGAATC GCCTGTCAGC
TCGAGAGTAA CATCGCCGTT ACCCAATTCT GGAAACAGTC CCTATTCAAA ACACAAGCGC
ATAACTCGTA CTCACTGGAA GCATCCTTCA ACAACCCCTT TGTGTTCTAT ACGGGATTGT
GGAAAGACTT TAAATGTCAA GAATGGCATA GTAAATTGCA GGAAATGTGG GCTTCTCTTC
TGCAATGAAC ATACTCAATA TAGAGTCAAA TTGAAAAACT CCGAAGACGT CGAAAAAGAG
CCGCCGGTTT ACAACTCCAC TTTCGAGGGA ACATGGTCTA AGTGCTGCTG TGACTGTTAC
TACTCAAAAC CGGATCTAGC GGTCGGAACA CAGGTCAATA GCCGTGACTT GACTAGCCAA
TTCGCCAAAA AGAGGCAAGA ACTCCTAGAT GACAAGCAGT TGGCCAGAGT CAAAGTGCAA
AAGAGGTTCA TAAAGCTAGC TGACTTGCTT GCTGAAACTA GTTTCCATGA GAGGAACGAA
TCGAAAACGC TATGGGGTGC CATACAAAAG ACTCTTATCG ACTCCAAGTC TGAAGCAGAG
AAGGAAATTA TTGGCTACGA CAACTGGCAG AGTGACAAGG AGGCCACCAA TTGCACAATT
TGCTTCGTTC GCTTTAATAT AGTCATCAGA AGGCACCATT GTAGATTATG TGGTAACATT
GTATGTGATG ATCCGTATGG AGCTAGAAAG AGCTGTTCAA TTGTTGTACC TTTGTCAAAA
TTATTAGAGA AATTACACAA TCTAAACTAT TCCCGGCTAG TCAAGGACAA TTTGAAAACG
TTGTTGCATG AAGACAGTAT CAAGTTTCGA TGCTGTGTTG ATTGCAAGAA CTCCCTTCTC
TACGACTGGA AATTGCTTCA TCTCAGGACT CCCAAGCAGA ACGAAACTGA AATATTCCTT
ATCTACAACG CAATATTGGC TCAAAAGCAT CAAATAAGCC AGCTTCTTCC GAAGTATGCC
AAGCATATAG ATACCACCTC TGATGAAGAA GAAAGCTATA CCAACAGGTT GAGGATAAAA
ATCATGACTT TCTTAAAAGA TTTCGAAAAT TTAACAACAC AGTTTCGAGG AAGGTTTTTC
ATACTGGAAA ACAACAAGCT TCTTGTAATA GACGACTTCG CAGCAGATTC TAGGCTAATC
ACTAATATTT ATCAGAGTTC GATTATGTTC CTCCAGGATA ACTTAATATG GTATAAGCAA
CTTAACGACA AACACAAAGA AATAGAGCAA CAGAGATTAA AGCAGTCCTT GGAAGAAAGG
GCCAAGGAAG AAACACCAGA GGTGCCGAGA CTAACCAAGA AACAGATTAG AGAACTCAGA
GAACAACTCA TGGTCATGAA TGAGCAGAAG TTCCTCGTAG AAAATATGAT CATGGAGTCT
ACAAAAGCAA GACGATTTGA AGAACTAAGT TCGCTTGAAC AGAACAAAAG GGAGTTAGAC
ATGACGATAG AGAATTTAGA AACTGAACTA GGAGAGTTTG GGTTCTGA
|
|---|
| Protein sequence | MANQHSRPTQ RRNLGSPFKS PEAIAKMSKS QNSNMTTSST LQTPDNVKSV QYEASPTPVR
HTAVKSLAPS SQYEEVPVAD PTKQTDSLTC PICSEHMLTL SQLNQHIDDA HQEKEMETDS
SNAANNLSNG GTSVGRLLGT NDVKRWFSGK SENQRKTPQK RKTISLDMLD DERGFSFSDN
GDGFRESPVS SRVTSPLPNS GNSPYSKHKR ITRTHWKHPS TTPLCSIRDC GKTLNVKNGI
VNCRKCGLLF CNEHTQYRVK LKNSEDVEKE PPVYNSTFEG TWSKCCCDCY YSKPDLAVGT
QVNSRDLTSQ FAKKRQELLD DKQLARVKVQ KRFIKLADLL AETSFHERNE SKTLWGAIQK
TLIDSKSEAE KEIIGYDNWQ SDKEATNCTI CFVRFNIVIR RHHCRLCGNI VCDDPYGARK
SCSIVVPLSK LLEKLHNLNY SRLVKDNLKT LLHEDSIKFR CCVDCKNSLL YDWKLLHLRT
PKQNETEIFL IYNAILAQKH QISQLLPKYA KHIDTTSDEE ESYTNRLRIK IMTFLKDFEN
LTTQFRGRFF ISENNKLLVI DDFAADSRLI TNIYQSSIMF LQDNLIWYKQ LNDKHKEIEQ
QRLKQSLEER AKEETPEVPR LTKKQIRELR EQLMVMNEQK FLVENMIMES TKARRFEELS
SLEQNKRELD MTIENLETEL GEFGF
|
|---|
| |