Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59314 |
Symbol | |
ID | 4838614 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1170042 |
End bp | 1172492 |
Gene Length | 2451 bp |
Protein Length | 811 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389929 |
Product | predicted protein |
Protein accession | XP_001384524 |
Protein GI | 150865347 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACTGG CGAATTCAGA CATCTCGAAT TCCGATTTCG ACATCAACAT CTTGGACGAT GCGTTCGAGA CTCCCGACAT CGAATTGACG TTTCCATTGC CTACAGACAA AGAGACCTAC ATCGACATAG AGGGAAACGA AAAAGCTAGC AAGAGCATCG GGATATTATT CTCGGCTTTC AAGCTCTTCT CTGGCATTCC TGTGGAGAAA GTGTATTCTA ACAATGAATA CCGTTACTTC ACCAATAAGC ACAGCGCTGC CTTCAAGAAG AAGTTCGAAG ACTACATGAA CGACAAGTTG GAAAAGTCCG ACAAGAAATT GGATGAGTTA ATCTACACTT TAATCAACCA GGAGTTGAAC TTGAAGTTGA TCACGCCAGC CGATTTCAAC CACCGGTTCA AGGAAGTCAA GAAGTTCATG GTTGCTTACT ACAAAAAGGA AAACGAAAAG AACTTGCCCA CCTTCCACTC TCACAACTTC GTTAGAACGG CTTATATCAC CGTTATCATG GTCTTACGCA AGATGTTCCC CAGAGGTATC TGGGTTAGTA GACAAGATTT CTCCGAATTG TACAGAAAAT ACTTAGAAGA CCCAATGTCC ATCATTTTCT TGCCCTCGCA TCAGAGTCAT GTTGATTACA TCATTCTCCA TGTGTTGTGT GTGAGATTCC AGATGGCTAT ACCTACTGTT GTTGCCGGAG AAAATTTGAA CGTAGCCGTC TTTGGTAAGT TCATGAGGAA CTTAGGTGCT ATCTTTATCA AGAGGTCATT CAACAACGAG TTGTATACTG AAAGAAACTT GAACAACGTG ATTGAGTTCA TGTTGGTGAA CAAAATCAAT TTTGAGGTGT TTATCGAAGG CACCAGATCC AGAGACGGAA AATTGTTATT ACCAAAATAT GGCATTCTCA AGACGTTGAC CAGCATCTAC TTGAAGCAAC GTTACTTAGA AAACAACTCC AACTTCGACT TGTTGTTCCA GCCAGTTTCC GTTAGATATG AGAGAATTTA CGAGACTGAC GGCTACTTAA AGGAGTTGAC TGGTAGTGAT AAGAAGCAAG AATCTATGCT CAACATTGTC CAAAACGGTG TTGGTAACTT GTTAGGTGCC GAAACCGCAG ATCCTGTTGT GTGGGGCAAA GATGGCTTCA ATGACAATTC CGAACGTAAT TTGAACGGTA AGATCTTCTT CAAGTTGGGA AATTCCTTCA GACTTTCTTC CTTCGTTGAA AGTGATCGTG AGTTCCTCAA CGAAGTCACA GCTACTATCA AATCCAACCC ATCGGCTAGT CTTGAAACCG AGCATTCAAA GGTGAATTTG AAGCGTTTGG GTTTCAAGAT TTTGCATGAA GTCAATCGTA TCAGTTACTT GCCAGAAATT GCTATCATTG GAACGGCATT GCAAGTGCAT TACTATTTCT TCAAGAAAGA TGTATTTGAC GTATATGAAG TGATTCCAAT TCTTAAGTTG GTAGCCGAAA CTCTATATAA TGAGAACTTG GACAGTCCTA CCAACTCCAA GATACTTCAC GACTTACTTA GCCTTTCGGA CGAAGACATG GCTGTACTCA TAAAAACACA GATTATTGAT TTCTTGCGTT TAGTCAGAGT GAATGAACGT AAGAACTTGA TAAAAATCGA GAATCCAATC GAATTGTTGT ACTACAAAAA TTTGTCTATT CATTTGATCA TCCAGAGATG TTTGATCAGT TTCATTTTGT TGCTCTTGGA AGGACTCGGT CAGTCCAACT ACCGTGTCAT CAGCAAGGTG TTCTACATTG TCACAGGCTT CCTCAAGAAC GAGTTCTTGT TTGACTACAA CTACAACGAA AGAAATGAGC TTTCGTTCAT TTTGAAGGAC TTTGTACAGA GCGGAGTTAT TGCTGTAGAG ACTAATGACA AGGGAGAAGA ATTCTACAAG GTGATCGATG TAAAGTATTT ACAGTTGTTT GGTGACTTGG CTACTCCATT TTTGGAATCG TACTTGGTTC TTATTGATCA CATCTTTGAA CTCAACGAAA GGTTGGCCAG ACATTATAAA AAGAACAAGG CCGCTATTCA AAAGGATGCC ATCATCGATG AAGACGAGTT GAAATACCCC GACACGAAGT CGTTGTTGAA GTACATCACT TCTCAGAGCC GCAAACACCC TGAGCGTGTG GGGTCATTGG AATCTATCAA CAAACAGTAC TTGTTGAGTG ATATCTACTA TCTCGCCAAC TTGCAAGTTA TTCAAATCTT CAAAAATAAG GCCAAAACAA AAGCATTCGT CAAGATCACG AATGGCCGTG ACTTGAACAT TTTGCATGAT TTCTTGTCGC AGATTTTGGG CAAGAAGTCT GAGAAGACGT TGTTGACAGA TGAGATCAAC ATTAACTATG TTATTGACAT TGTTGACAAG AGAGATGACA GGGACGTCAA CCAGTTGAGA CTCGGTAGAA GTAAGTTGTG A
|
Protein sequence | MTSANSDISN SDFDINILDD AFETPDIELT FPLPTDKETY IDIEGNEKAS KSIGILFSAF KLFSGIPVEK VYSNNEYRYF TNKHSAAFKK KFEDYMNDKL EKSDKKLDEL IYTLINQELN LKLITPADFN HRFKEVKKFM VAYYKKENEK NLPTFHSHNF VRTAYITVIM VLRKMFPRGI WVSRQDFSEL YRKYLEDPMS IIFLPSHQSH VDYIILHVLC VRFQMAIPTV VAGENLNVAV FGKFMRNLGA IFIKRSFNNE LYTERNLNNV IEFMLVNKIN FEVFIEGTRS RDGKLLLPKY GILKTLTSIY LKQRYLENNS NFDLLFQPVS VRYERIYETD GYLKELTGSD KKQESMLNIV QNGVGNLLGA ETADPVVWGK DGFNDNSERN LNGKIFFKLG NSFRLSSFVE SDREFLNEVT ATIKSNPSAS LETEHSKVNL KRLGFKILHE VNRISYLPEI AIIGTALQVH YYFFKKDVFD VYEVIPILKL VAETLYNENL DSPTNSKILH DLLSLSDEDM AVLIKTQIID FLRLVRVNER KNLIKIENPI ELLYYKNLSI HLIIQRCLIS FILLLLEGLG QSNYRVISKV FYIVTGFLKN EFLFDYNYNE RNELSFILKD FVQSGTNDKG EEFYKVIDVK YLQLFGDLAT PFLESYLVLI DHIFELNERL ARHYKKNKAA IQKDAIIDED ELKYPDTKSL LKYITSQSRK HPERVGSLES INKQYLLSDI YYLANLQVIQ IFKNKAKTKA FVKITNGRDL NILHDFLSQI LGKKSEKTLL TDEININYVI DIVDKRDDRD VNQLRLGRSK L
|
| |