Gene PICST_59295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59295 
SymbolSAC3 
ID4838794 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1735447 
End bp1739346 
Gene Length3900 bp 
Protein Length1192 aa 
Translation table12 
GC content40% 
IMG OID640390109 
Productprotein involved in processes affecting the actin cytoskeleton and mitosis 
Protein accessionXP_001384284 
Protein GI150865176 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5079] Nuclear protein export factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA GAAATCGTAA CGGAAGAAAT AACAGCAGTA ACAGCAACAA AAATAGTATT 
AATAATAATA GCAACAATGG AAAATTGAAT TCTACTTCAT CTATATTTGC CAATCCTAAG
CTAAACGACT TGGAAAAGAA GAAGCAGGGT CTTCGTAATT CACTTTTTCA GCGCAAAGCC
AATAAGGAAA ATGTTCAAAG AAAGGTATCT GCCAATGTTG AACTGCCGGT GGCCGATCCT
CTCGATATAC CCACTAGAGT AATTCCTCCC CAGGGCCCCG TCAAGACAAT GCAGTTTTCT
GCTCAAGAAT TAAGTCGAAC TGGTCAATTG ATACCTAATC CTGAATCGTT TGGATTCCAC
CGTAATAATA AGAATATTCG GCCACGGCCA GTGCCGAAGT ACCTATTGGT ACAAACTCGT
TTATTGCATA CACCTCCTTT TGTTCAGAAC CAATGGGACA AACAGAACCA GGACAAGATG
GTAGCCATGG AAAATGAGAA TGGAGGAAGA GATGCACAGG GACTCTATGA GCAGTTTCAG
AAAATGAGAG AAGTGGAACG GAAACAGATG GAGAACTTGG GTCTTGTAGA TGCTGAGAAT
ATCAGTAAGG ACTTGAACGA CGCCATTTCG TTCCAAGGAT CTTGTTTGGA CATGTGTCCT
GTCTTTGAGA GAGTCAGAAG ATCATTGGAA AACAACGTGA AGGCATTAGA AAAAGATCCA
GCTACCGGGA AGATCTCCAG ACAAAGAGCT GTGAAAGCAT TTTCCAGACC AGCTGCTGGC
CAACCTCCTC CATTACCGTC GGAAGTGCGT CCCCCAAGTG TGCTCGTGCA ATCTTTAGAT
TACCTTGTGG ACACCGTAGT TGATATGCTC CCAGAAGCAC ATTCGTTTAT CTGGGATAGA
ACCAGATCCA TTCGTCAGGA TTTCACGTAC CAGAACTCCT TTGGTCCTGA AGCCATAGAT
TGTAATGAGC GGATTGTCAG AATCCATTTG CTCTGTTTTC ATGTCATGGC CGGCAGCGAA
GTTGAATTCT CGCAACAACA GGAGTTGGAG CAGTTCAACA AGGCATTACA GACATTAATT
GAAATCTACC AAGATGTACG AAATCACGGG GGTGCAGCAC CAAACGAAGC TGAATTCAGA
GCATATCATT TACTTAGTCA CATCAGAGAC CCGGAGTTGG AAAGAGAAAT ACAGAAGCTA
CCACCAGATA TATTTCAGGA TTCTCGTGTG CAACTTGCAT TACAGTTCAG AAGCATTATA
TCTCAAAACA ATGTCGTTGA ACGAGGTGTT ACTGTTTCAG CTGGAGCTGT CAACTTGTTT
GTAGAGTTCT TCAGAAAGGT TTACAGCAGC CAAACTCCTT TCTTGATGTC GTGTCTTCTC
GAGATTCATT TCAGTGAGAT TCGCTTTTAC GCTTTAAAGG CAATGGCAAG AAGTTATCAC
ACAAAGGGTA AGGCTTATTC CGGTCAAGTA TTGACTAACA TGTTGGGTTT TGATACACTT
GAAAAATTGG TCAAATTTGT AACCTACTAC GAAATTGATA CCTTTCAGGA TGGTCAGGAT
ATCTTGGTCG ATTTGTTCAA TAAAGAGAAG CTTGAATCAA AGTATAAATT AAACTCGATT
ACTGAAAAAC CTAGACAGCT GCCAGTGTAC TCACCACAAT TGGATGTGAA AATCCCTGGC
TCTTACAAGC AGATAATTAA CAGTGGAAAA CCAAATGGAA ATTTAGCGTT AAACCATCAG
AAAATTGATG CACCAGTATT ATCAAAACCA GAATCTGCAT TTACACAACC ATTCTCAATA
CCTTCATTCG CCGCATCCAA GTCAACTTCG ACCGCTATAC ATCCTTTACA AACATCGACA
TCTATATTTG GTAATCAGTC TCAACCGACA AATAACCCTT CATTCCAGTC AAAGGACACA
TCATTTAAAA CATCTTCTAG TAAAGCCCCA GCTTCTTTGT CTTCAGATAT CCAGAGCCAG
AATATCCACA AGAGGGGGCA GGAACCTTTA TTGGCTCCTA ATTTTGCCAA AAGTGCATCT
GCTACTGTTT CCAATAAGTC TCCACAGTTC AATTTGGGAA ACCCATCGTT AAAGTTGAAA
AACGATAGTT CAGCTATCTC ATTTACTCCA CCAATTAAGT CATCAAAACC GGTTATTAAC
ATCACCAAAC CCACTTCCGT AAAGTATGAA GCTGAGGAGC CTCCTTTTGT TAAGTCGGTA
CCGGCAATAA TTGAGACGCC AATAATTAAG AAACCCACGG TAGTTCTTAG GAAGTTGTCA
AGTTTACCCC AATATCCAGA GGCAGTGAAA CAGATATTTG ACAGCATTCT TCAGGGAACC
ATTGATCACG AGTTGAGTGC ACTTCTTCCC CAGTTGATAA AACGTCAGAA TCGTCATCAA
GAACACAAAC AGATCATAGG TTCACTTAGT GAAGAGTTAT ATGATGCATT CATTTCTGAA
ATTGTTTATC AAACTACATT AGAGTCACGA GCAGTTGAGT TCTACAATCA CAACTTGAAG
TTGAGATACA TCGAGAAGGT TATTGCTGTG GGTATAGCTG CTCATAAAAA GAGTGAATTA
AAGAGAAACA AACTAGCTGA ATTAAACTCC ATCTCTTTCA AGGTACCTGT TCATAAGAGG
AAGATATCCA CGCATGATGG AAATGATTCG AGAATCGTCA AGAGAAGAAT TGCTTCTCGA
GATATTAGCT CTTCTTCAGT AGTTCAAACA CAAAGATTGG TTCATGAATT GTGGTTGCCT
CTTGATTATG ACAAGTTTAT TGGACAGTGT TGTTCAAACA TCAAGATTGA CATTGAGAGT
GAGAGTATTC AAGTCAAATT CTTGTTGATT GTTGAGAATT GGGGTTCCCA GTATTCCAAA
TGGCTCAACA CCAAGATGGA ACTTAATTCC AATCCTCAGA GACAGGTATA TGAGAAAACG
GTGAAGAATG ACAAGTTAAC CATAGATATA TTGAGTCTTC CGCCGACGAA CTACTTGAAC
AAAGAGTTTT TCTCTAACAC TTCATTCTTG CTTTTTGAGT GTGGACTCAC GACTTCGGCA
ACAATTCCAA TTACAGCAAA GCTTGAGCGC GATAGATCTG TTTTAGATAA GATTGTGTCC
TTGGTCGACA AGTTCAGTTT GTACAAGGTA CAGATTTTAA TTCTTTTCTG GGATGCCTCT
GGATCGTTGA TTTCAAAAGA GGAAGTGAAA CAAAGGTTGT CTATTGCCGA ATTTGAGGGA
AAGGATAATG TTAAAGGCAT TATTTTGTGC GATATGACAG TTCAAGATAG TAACATTGGA
GAGGTGTTCA ACGGAGGCTT TGTCAAACTT TCCAATTCAT TTAACGGAGA ATTAACTAGA
AGAGGTTCCA AGAAGAAGGC TCAAATTCGT AAAGTTCGGG ATAAAAATAG ACAGTTGGAA
GCATCCGAAT TTTCTTCCAA GGAACCTAGC CCATCGGATG TCTTGCAATT AAAGGAGTCT
CGCATGTTGG AAAAAGCTAA AGGGGTCAGA AAGTATGACT ATCTACAAAG TCATGTGCGA
AATAATACCT CAATCGCCAA CTTGTCAGCA ACTAACATTT CTGCCAATAC AAGTTTGCTT
ACTAGAATGA ATAACAAGTC GTATTTATCG AACCTCACGT TCCAGAATCG AAACCAAAAC
TCGACATTTT TGAATATCAA TACCTCAACA GCAAATAATT CTTTGGCCAA TGAGACTACC
TTGAACAATG TTTCCATATT GGCTGGATTT GGCAATGGTG TAGTAGAAGA AAGCACCCTA
GACAATTCTC CTTCAAACAA GAAGTTTGCT GTGCCGGATA ACAAAACAGT TCCCAAGAAG
ATCCAACAGT TGCGGGATCT CACGGCCGGA ATCAGGTCCA AGTATAGCAG AAAGCCGTGA
 
Protein sequence
MKQRNRNGRN NSSNSNKNSI NNNSNNGKLN STSSIFANPK LNDLEKKKQG LRNSLFQRKA 
NKENVQRKVS ANTMQFSAQE LSRTGQLIPN PESFGFHRNN KNIRPRPVPK YLLVQTRLLH
TPPFVQNQWD KQNQDKMVAM ENENGGRDAQ GLYEQFQKMR EVERKQMENL GLVDAENISK
DLNDAISFQG SCLDMCPVFE RVRRSLENNV KALEKDPATG KISRQRAVKA FSRPAAGQPP
PLPSEVRPPS VLVQSLDYLV DTVVDMLPEA HSFIWDRTRS IRQDFTYQNS FGPEAIDCNE
RIVRIHLLCF HVMAGSEVEF SQQQELEQFN KALQTLIEIY QDVRNHGGAA PNEAEFRAYH
LLSHIRDPEL EREIQKLPPD IFQDSRVQLA LQFRSIISQN NVVERGVTVS AGAVNLFVEF
FRKVYSSQTP FLMSCLLEIH FSEIRFYALK AMARSYHTKG KAYSGQVLTN MLGFDTLEKL
VKFVTYYEID TFQDGQDILV DLFNKEKLES KYKLNSITEK PRQSPVYSPQ LDVKIPGSYK
QIINSGKPNG NLALNHQKID APVLSKPESA FTQPFSIPSF AASKSTSTAI HPLQTSTSIF
GNQSQPTNNP SFQSKDTSFK TSSSKAPASL SSDIQSQNIH KRGQEPLLAP NFAKSASATV
SNKSPQFNLG NPSLKLKNDS SAISFTPPIK SSKPVINITK PTSVKYEAEE PPFVKSVPAI
IETPIIKKPT VVLRKLSSLP QYPEAVKQIF DSILQGTIDH ELSALLPQLI KRQNRHQEHK
QIIGSLSEEL YDAFISEIVY QTTLESRAVE FYNHNLKLRY IEKVIAVGIA AHKKSELKRN
KLAELNSISF KVPVHKRKIS THDGNDSRIV KRRIASRDIS SSSVVQTQRL VHELWLPLDY
DKFIGQCCSN IKIDIESESI QVKFLLIVEN WGSQYSKWLN TKMELNSNPQ RQVYEKTVKN
DKLTIDILSL PPTNYLNKEF FSNTSFLLFE CGLTTSATIP ITAKLERDRS VLDKIVSLVD
KFSLYKVQIL ILFWDASGSL ISKEEVKQRL SIAEFEGKDN VKGIILCDMT VQDSNIGEVF
NGGFVKLSNS FNGELTRRGS KKKAQIRKNR NQNSTFLNIN TSTANNSLAN ETTLNNVSIL
AGFGNGVVEE STLDNSPSNK KFAVPDNKTV PKKIQQLRDL TAGIRSKYSR KP