Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59295 |
Symbol | SAC3 |
ID | 4838794 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1735447 |
End bp | 1739346 |
Gene Length | 3900 bp |
Protein Length | 1192 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390109 |
Product | protein involved in processes affecting the actin cytoskeleton and mitosis |
Protein accession | XP_001384284 |
Protein GI | 150865176 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5079] Nuclear protein export factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA GAAATCGTAA CGGAAGAAAT AACAGCAGTA ACAGCAACAA AAATAGTATT AATAATAATA GCAACAATGG AAAATTGAAT TCTACTTCAT CTATATTTGC CAATCCTAAG CTAAACGACT TGGAAAAGAA GAAGCAGGGT CTTCGTAATT CACTTTTTCA GCGCAAAGCC AATAAGGAAA ATGTTCAAAG AAAGGTATCT GCCAATGTTG AACTGCCGGT GGCCGATCCT CTCGATATAC CCACTAGAGT AATTCCTCCC CAGGGCCCCG TCAAGACAAT GCAGTTTTCT GCTCAAGAAT TAAGTCGAAC TGGTCAATTG ATACCTAATC CTGAATCGTT TGGATTCCAC CGTAATAATA AGAATATTCG GCCACGGCCA GTGCCGAAGT ACCTATTGGT ACAAACTCGT TTATTGCATA CACCTCCTTT TGTTCAGAAC CAATGGGACA AACAGAACCA GGACAAGATG GTAGCCATGG AAAATGAGAA TGGAGGAAGA GATGCACAGG GACTCTATGA GCAGTTTCAG AAAATGAGAG AAGTGGAACG GAAACAGATG GAGAACTTGG GTCTTGTAGA TGCTGAGAAT ATCAGTAAGG ACTTGAACGA CGCCATTTCG TTCCAAGGAT CTTGTTTGGA CATGTGTCCT GTCTTTGAGA GAGTCAGAAG ATCATTGGAA AACAACGTGA AGGCATTAGA AAAAGATCCA GCTACCGGGA AGATCTCCAG ACAAAGAGCT GTGAAAGCAT TTTCCAGACC AGCTGCTGGC CAACCTCCTC CATTACCGTC GGAAGTGCGT CCCCCAAGTG TGCTCGTGCA ATCTTTAGAT TACCTTGTGG ACACCGTAGT TGATATGCTC CCAGAAGCAC ATTCGTTTAT CTGGGATAGA ACCAGATCCA TTCGTCAGGA TTTCACGTAC CAGAACTCCT TTGGTCCTGA AGCCATAGAT TGTAATGAGC GGATTGTCAG AATCCATTTG CTCTGTTTTC ATGTCATGGC CGGCAGCGAA GTTGAATTCT CGCAACAACA GGAGTTGGAG CAGTTCAACA AGGCATTACA GACATTAATT GAAATCTACC AAGATGTACG AAATCACGGG GGTGCAGCAC CAAACGAAGC TGAATTCAGA GCATATCATT TACTTAGTCA CATCAGAGAC CCGGAGTTGG AAAGAGAAAT ACAGAAGCTA CCACCAGATA TATTTCAGGA TTCTCGTGTG CAACTTGCAT TACAGTTCAG AAGCATTATA TCTCAAAACA ATGTCGTTGA ACGAGGTGTT ACTGTTTCAG CTGGAGCTGT CAACTTGTTT GTAGAGTTCT TCAGAAAGGT TTACAGCAGC CAAACTCCTT TCTTGATGTC GTGTCTTCTC GAGATTCATT TCAGTGAGAT TCGCTTTTAC GCTTTAAAGG CAATGGCAAG AAGTTATCAC ACAAAGGGTA AGGCTTATTC CGGTCAAGTA TTGACTAACA TGTTGGGTTT TGATACACTT GAAAAATTGG TCAAATTTGT AACCTACTAC GAAATTGATA CCTTTCAGGA TGGTCAGGAT ATCTTGGTCG ATTTGTTCAA TAAAGAGAAG CTTGAATCAA AGTATAAATT AAACTCGATT ACTGAAAAAC CTAGACAGCT GCCAGTGTAC TCACCACAAT TGGATGTGAA AATCCCTGGC TCTTACAAGC AGATAATTAA CAGTGGAAAA CCAAATGGAA ATTTAGCGTT AAACCATCAG AAAATTGATG CACCAGTATT ATCAAAACCA GAATCTGCAT TTACACAACC ATTCTCAATA CCTTCATTCG CCGCATCCAA GTCAACTTCG ACCGCTATAC ATCCTTTACA AACATCGACA TCTATATTTG GTAATCAGTC TCAACCGACA AATAACCCTT CATTCCAGTC AAAGGACACA TCATTTAAAA CATCTTCTAG TAAAGCCCCA GCTTCTTTGT CTTCAGATAT CCAGAGCCAG AATATCCACA AGAGGGGGCA GGAACCTTTA TTGGCTCCTA ATTTTGCCAA AAGTGCATCT GCTACTGTTT CCAATAAGTC TCCACAGTTC AATTTGGGAA ACCCATCGTT AAAGTTGAAA AACGATAGTT CAGCTATCTC ATTTACTCCA CCAATTAAGT CATCAAAACC GGTTATTAAC ATCACCAAAC CCACTTCCGT AAAGTATGAA GCTGAGGAGC CTCCTTTTGT TAAGTCGGTA CCGGCAATAA TTGAGACGCC AATAATTAAG AAACCCACGG TAGTTCTTAG GAAGTTGTCA AGTTTACCCC AATATCCAGA GGCAGTGAAA CAGATATTTG ACAGCATTCT TCAGGGAACC ATTGATCACG AGTTGAGTGC ACTTCTTCCC CAGTTGATAA AACGTCAGAA TCGTCATCAA GAACACAAAC AGATCATAGG TTCACTTAGT GAAGAGTTAT ATGATGCATT CATTTCTGAA ATTGTTTATC AAACTACATT AGAGTCACGA GCAGTTGAGT TCTACAATCA CAACTTGAAG TTGAGATACA TCGAGAAGGT TATTGCTGTG GGTATAGCTG CTCATAAAAA GAGTGAATTA AAGAGAAACA AACTAGCTGA ATTAAACTCC ATCTCTTTCA AGGTACCTGT TCATAAGAGG AAGATATCCA CGCATGATGG AAATGATTCG AGAATCGTCA AGAGAAGAAT TGCTTCTCGA GATATTAGCT CTTCTTCAGT AGTTCAAACA CAAAGATTGG TTCATGAATT GTGGTTGCCT CTTGATTATG ACAAGTTTAT TGGACAGTGT TGTTCAAACA TCAAGATTGA CATTGAGAGT GAGAGTATTC AAGTCAAATT CTTGTTGATT GTTGAGAATT GGGGTTCCCA GTATTCCAAA TGGCTCAACA CCAAGATGGA ACTTAATTCC AATCCTCAGA GACAGGTATA TGAGAAAACG GTGAAGAATG ACAAGTTAAC CATAGATATA TTGAGTCTTC CGCCGACGAA CTACTTGAAC AAAGAGTTTT TCTCTAACAC TTCATTCTTG CTTTTTGAGT GTGGACTCAC GACTTCGGCA ACAATTCCAA TTACAGCAAA GCTTGAGCGC GATAGATCTG TTTTAGATAA GATTGTGTCC TTGGTCGACA AGTTCAGTTT GTACAAGGTA CAGATTTTAA TTCTTTTCTG GGATGCCTCT GGATCGTTGA TTTCAAAAGA GGAAGTGAAA CAAAGGTTGT CTATTGCCGA ATTTGAGGGA AAGGATAATG TTAAAGGCAT TATTTTGTGC GATATGACAG TTCAAGATAG TAACATTGGA GAGGTGTTCA ACGGAGGCTT TGTCAAACTT TCCAATTCAT TTAACGGAGA ATTAACTAGA AGAGGTTCCA AGAAGAAGGC TCAAATTCGT AAAGTTCGGG ATAAAAATAG ACAGTTGGAA GCATCCGAAT TTTCTTCCAA GGAACCTAGC CCATCGGATG TCTTGCAATT AAAGGAGTCT CGCATGTTGG AAAAAGCTAA AGGGGTCAGA AAGTATGACT ATCTACAAAG TCATGTGCGA AATAATACCT CAATCGCCAA CTTGTCAGCA ACTAACATTT CTGCCAATAC AAGTTTGCTT ACTAGAATGA ATAACAAGTC GTATTTATCG AACCTCACGT TCCAGAATCG AAACCAAAAC TCGACATTTT TGAATATCAA TACCTCAACA GCAAATAATT CTTTGGCCAA TGAGACTACC TTGAACAATG TTTCCATATT GGCTGGATTT GGCAATGGTG TAGTAGAAGA AAGCACCCTA GACAATTCTC CTTCAAACAA GAAGTTTGCT GTGCCGGATA ACAAAACAGT TCCCAAGAAG ATCCAACAGT TGCGGGATCT CACGGCCGGA ATCAGGTCCA AGTATAGCAG AAAGCCGTGA
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Protein sequence | MKQRNRNGRN NSSNSNKNSI NNNSNNGKLN STSSIFANPK LNDLEKKKQG LRNSLFQRKA NKENVQRKVS ANTMQFSAQE LSRTGQLIPN PESFGFHRNN KNIRPRPVPK YLLVQTRLLH TPPFVQNQWD KQNQDKMVAM ENENGGRDAQ GLYEQFQKMR EVERKQMENL GLVDAENISK DLNDAISFQG SCLDMCPVFE RVRRSLENNV KALEKDPATG KISRQRAVKA FSRPAAGQPP PLPSEVRPPS VLVQSLDYLV DTVVDMLPEA HSFIWDRTRS IRQDFTYQNS FGPEAIDCNE RIVRIHLLCF HVMAGSEVEF SQQQELEQFN KALQTLIEIY QDVRNHGGAA PNEAEFRAYH LLSHIRDPEL EREIQKLPPD IFQDSRVQLA LQFRSIISQN NVVERGVTVS AGAVNLFVEF FRKVYSSQTP FLMSCLLEIH FSEIRFYALK AMARSYHTKG KAYSGQVLTN MLGFDTLEKL VKFVTYYEID TFQDGQDILV DLFNKEKLES KYKLNSITEK PRQSPVYSPQ LDVKIPGSYK QIINSGKPNG NLALNHQKID APVLSKPESA FTQPFSIPSF AASKSTSTAI HPLQTSTSIF GNQSQPTNNP SFQSKDTSFK TSSSKAPASL SSDIQSQNIH KRGQEPLLAP NFAKSASATV SNKSPQFNLG NPSLKLKNDS SAISFTPPIK SSKPVINITK PTSVKYEAEE PPFVKSVPAI IETPIIKKPT VVLRKLSSLP QYPEAVKQIF DSILQGTIDH ELSALLPQLI KRQNRHQEHK QIIGSLSEEL YDAFISEIVY QTTLESRAVE FYNHNLKLRY IEKVIAVGIA AHKKSELKRN KLAELNSISF KVPVHKRKIS THDGNDSRIV KRRIASRDIS SSSVVQTQRL VHELWLPLDY DKFIGQCCSN IKIDIESESI QVKFLLIVEN WGSQYSKWLN TKMELNSNPQ RQVYEKTVKN DKLTIDILSL PPTNYLNKEF FSNTSFLLFE CGLTTSATIP ITAKLERDRS VLDKIVSLVD KFSLYKVQIL ILFWDASGSL ISKEEVKQRL SIAEFEGKDN VKGIILCDMT VQDSNIGEVF NGGFVKLSNS FNGELTRRGS KKKAQIRKNR NQNSTFLNIN TSTANNSLAN ETTLNNVSIL AGFGNGVVEE STLDNSPSNK KFAVPDNKTV PKKIQQLRDL TAGIRSKYSR KP
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