Gene PICST_59263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59263 
SymbolGCD7 
ID4838545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1679662 
End bp1680741 
Gene Length1080 bp 
Protein Length359 aa 
Translation table12 
GC content45% 
IMG OID640389860 
Producttranslation initiation factor eIF2b 
Protein accessionXP_001384626 
Protein GI150865417 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTG CCACTGTGAC ACCCGAGATC CGGGCCATAA TTGACCCTTT GGTATCTTCG 
TTGAAACGTC AGCAGCTCAA CGGAGACAAA ACCATTGCTT TGGCCGTTTC CCAATTGCTT
ATGAAGGTCA TAGCTGCCGC GAGATGGACC AATCCGTACG ACTTGATTGA CATAATCCGA
AAAGTAGGCA CCACACTCAG TTCTGCACAG CCTAGGAAAG TCGTGACGGG TAACATAGTC
AGAAGAGTGC TAGCATTAAT CCGAGATGAG ATTGAGACTG AGCATGAAAA TGGGGCAACA
CCCATGATGA GCTCTATGTT CTCATTGCTT TCTACCACCA ACGATACTAG TCACAAGGAA
CAGCATAATC AGCTGAAAAA GCAGATGAGT GAATTAAGAT CAATAATTAT TCAGGGAATT
CGTGATTTGG TGGACGAAAT CACCAACGTC AACGACGGAA TCGAGTCGAT GTCGATGGAC
TTGATTCACG ACAACGAAAT CTTATTGACT CCTACACCTA CCTCAGAGAC CGTGTTGCAA
TTTTTGATCA AGGCCAGACA AAAGAGAAAG TTTACGGTTT TAATCACCGA GAGTTTCCCC
AACTACATCA AGCAATCGCA TCTGTTTGCG AAGAAGTTGG CCGAACACAA GATCGAGACC
ATCTTGGTAC CAGACTCAAC CATATATGCC GTAATGTCCC GTGTAGGTAA GGTAATAATA
GGCTCCAGTG CCGTATTTGT CAATGGAGGC TGTATGGCCA ACTCGGGGGT ATCACACGTA
GTCGAGTGTG CCAAAGAACA CAGAACTCCT GTGTTTGCTC TTGCGGGCTT GTACAAGTTA
TCACCATTAT ATCCCTTCAC CAGAGATGAC TTAATAGAAG TGGGAAACTC CGGCAAAGTC
TTGAACTATG ACGACTTCAA ACTCGTCGAC AATGTAGAGC TCGTCACCAA CCCCTTGGAT
GACTATATCC CTCCTGAGAA TATTGACATC TACATCACCA ACGTTGGGGG CTTTGCTCCT
TCTTTCATCT ATAGAATAGT GTTGGATAAC TACAAGACTG AAGACAACAG CCTTGAATAG
 
Protein sequence
MPAATVTPEI RAIIDPLVSS LKRQQLNGDK TIALAVSQLL MKVIAAARWT NPYDLIDIIR 
KVGTTLSSAQ PRKVVTGNIV RRVLALIRDE IETEHENGAT PMMSSMFSLL STTNDTSHKE
QHNQSKKQMS ELRSIIIQGI RDLVDEITNV NDGIESMSMD LIHDNEILLT PTPTSETVLQ
FLIKARQKRK FTVLITESFP NYIKQSHSFA KKLAEHKIET ILVPDSTIYA VMSRVGKVII
GSSAVFVNGG CMANSGVSHV VECAKEHRTP VFALAGLYKL SPLYPFTRDD LIEVGNSGKV
LNYDDFKLVD NVELVTNPLD DYIPPENIDI YITNVGGFAP SFIYRIVLDN YKTEDNSLE