Gene PICST_59170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59170 
Symbol 
ID4838717 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1189220 
End bp1189591 
Gene Length372 bp 
Protein Length116 aa 
Translation table12 
GC content44% 
IMG OID640390032 
Productpredicted protein 
Protein accessionXP_001384180 
Protein GI126135312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.273554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACG AGAGAACTCT TCTCTCTTGG ATTCGAACAG CGGTGACGTT TGTCACGTTT 
GGGATCATGT TTCTTCAGTT CTTCAGGCTC GAAGAGAAAT CCAACTTCAA GGTCGAGAAA
GAAGGAATTG AGTACGATAT CGCCGACAAA AAAACGAGAA CCATCCATGG CATGAGCCGT
CCACTTGCAG GCATGTGTAT ATTGCTTGGA CTCTTCACGG TGTTGTTTGG TGGCTATCGG
TACTTTGAGG TTCAGAGCCT ATTGATGAGG AGCTACTATC CAGCAACGAG GTTGTCGATA
GCAGTGTTGA TTTTGGTCAA TGTGGCTTTG TTTGTGTTGC TCTTTACCAT TGATATTAAG
ATCAGTATAT AA
 
Protein sequence
MANERTLLSW IRTAVTFVTF GIMFLQFFRL EEKSNFKYDI ADKKTRTIHG MSRPLAGMCI 
LLGLFTVLFG GYRYFEVQSL LMRSYYPATR LSIAVLILVN VALFVLLFTI DIKISI