Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59125 |
Symbol | |
ID | 4838597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 78544 |
End bp | 79200 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389912 |
Product | predicted protein |
Protein accession | XP_001383974 |
Protein GI | 126134900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0319834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAT ACAAAGTTGT TCCAAAGAGT AGATACTGCC GTCATTACGC CGAGGTTGTT AAAGAAGAAG TGGCTATTGA AGAAGACAAC AATGATGCCG ATGAAGAATC TTCGTGGTTC GGTTTTGGTA AGAAAAAGAC TGCTCCTCAA AAACCATTGG AGAAGAAGAA AAACCCCGGA GGAGAATTCA ACGGTTTGTG GGTTTACTTA TTCCCAAGCA ATGGTGTCAA CTGTTACTCC CCTGCTTGGT ACTCTATCAG AGTGTTGCCT CAGAGTGCTA ACCACACAAT CTTGCAATAT GACATATACA CGAAGAAGGG GTTAGAAGAT GCTGCGAAGA AAGAATTTGT GGATTTCTTG CAATTGGTCG AACTCGAGGA CTTCAACTTA TGCCAATTGA CCCAGAAGAA CCTTATGGAA GGAATCTACT CTTCTGGTTA TTTGCACCCA ACCAAGGAAA GAGGGGTGTT GTACTACCAA GGCGTAGTCA GAGATATGGT AAAGAAACAC TTTGCTCTTG AAGCTGCTGC TGGAAAGCCT ATCAACCCAG CGTTCGTGGG ACGTAATCAA AAGAACGAGG AGATTGAGGA GTTGGAAGCA ATCTGTAATT CTCTTGAATG TAGTTCTGGT AACTCCAGCA AGGAATTTGA ATGGTAG
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Protein sequence | METYKVVPKS RYCRHYAEVV KEEVAIEEDN NDADEESSWF GFGKKKTAPQ KPLEKKKNPG GEFNGLWVYL FPSNGVNCYS PAWYSIRVLP QSANHTILQY DIYTKKGLED AAKKEFVDFL QLVELEDFNL CQLTQKNLME GIYSSGYLHP TKERGVLYYQ GVVRDMVKKH FALEAAAGKP INPAFVGRNQ KNEEIEELEA ICNSLECSSG NSSKEFEW
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