Gene PICST_59087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59087 
Symbol 
ID4838639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp210845 
End bp211432 
Gene Length588 bp 
Protein Length195 aa 
Translation table12 
GC content44% 
IMG OID640389954 
Productpredicted protein 
Protein accessionXP_001384342 
Protein GI126135636 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01159] density-regulated protein DRP1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG TTGTCGCCAG AGAAGTGTAC TACTGTGGGG TTTGCAGTTT CCCTCCCGAA 
TACTGCGAGT TTGGCGTTTC TTTGAAGCGT TGCAAAGATT GGCTTCAGGA CAACAACCAA
GAGCTTTTTG ACAAGATTTA CTCCGACGAT GCATTAGCCA CGCAGACATC GACTTTGTCG
ATTGAAAGAC AGGAAAAGAT TTCTCAAGAG CTTGCGAAGA AACAGTTGAA GGAGGAGGCC
AAACAGGAGC GTGAATTGCA AAAGAAGCTT GCATCTAAGG TACTCATCAA AAGAATTGAG
AGAAACAGAA GAAAGCACAT CATTTCCATT TCGGGATTGG AGGTATTCAA TATCGACATG
AAGAAGTTGG CAAAGACTTT TGCCTCAAAA TTTGCTACAG GTGCCAGTGT CACTAAGACA
GCAGACAAGA AAGAAGAAAT CTTGGTACAG GGAGACGTTT CAGACGAGGC TAAAGAGTAT
ATTGAAAAGT TGTTAGAGGA ACAGGGTTTG AACGGAGTCG AGGTTGAGCA GGTTGACGAA
AAGAAGAAGA AGAAGGCTAC TGCTCCAGGT GCTACACCAG CAGCATAG
 
Protein sequence
MTEVVAREVY YCGVCSFPPE YCEFGVSLKR CKDWLQDNNQ ELFDKIYSDD ALATQTSTLS 
IERQEKISQE LAKKQLKEEA KQERELQKKL ASKVLIKRIE RNRRKHIISI SGLEVFNIDM
KKLAKTFASK FATGASVTKT ADKKEEILVQ GDVSDEAKEY IEKLLEEQGL NGVEVEQVDE
KKKKKATAPG ATPAA