Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59087 |
Symbol | |
ID | 4838639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 210845 |
End bp | 211432 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389954 |
Product | predicted protein |
Protein accession | XP_001384342 |
Protein GI | 126135636 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01159] density-regulated protein DRP1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAGG TTGTCGCCAG AGAAGTGTAC TACTGTGGGG TTTGCAGTTT CCCTCCCGAA TACTGCGAGT TTGGCGTTTC TTTGAAGCGT TGCAAAGATT GGCTTCAGGA CAACAACCAA GAGCTTTTTG ACAAGATTTA CTCCGACGAT GCATTAGCCA CGCAGACATC GACTTTGTCG ATTGAAAGAC AGGAAAAGAT TTCTCAAGAG CTTGCGAAGA AACAGTTGAA GGAGGAGGCC AAACAGGAGC GTGAATTGCA AAAGAAGCTT GCATCTAAGG TACTCATCAA AAGAATTGAG AGAAACAGAA GAAAGCACAT CATTTCCATT TCGGGATTGG AGGTATTCAA TATCGACATG AAGAAGTTGG CAAAGACTTT TGCCTCAAAA TTTGCTACAG GTGCCAGTGT CACTAAGACA GCAGACAAGA AAGAAGAAAT CTTGGTACAG GGAGACGTTT CAGACGAGGC TAAAGAGTAT ATTGAAAAGT TGTTAGAGGA ACAGGGTTTG AACGGAGTCG AGGTTGAGCA GGTTGACGAA AAGAAGAAGA AGAAGGCTAC TGCTCCAGGT GCTACACCAG CAGCATAG
|
Protein sequence | MTEVVAREVY YCGVCSFPPE YCEFGVSLKR CKDWLQDNNQ ELFDKIYSDD ALATQTSTLS IERQEKISQE LAKKQLKEEA KQERELQKKL ASKVLIKRIE RNRRKHIISI SGLEVFNIDM KKLAKTFASK FATGASVTKT ADKKEEILVQ GDVSDEAKEY IEKLLEEQGL NGVEVEQVDE KKKKKATAPG ATPAA
|
| |