| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58964 |
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| Symbol | |
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| ID | 4838841 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 521090 |
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| End bp | 522762 |
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| Gene Length | 1673 bp |
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| Protein Length | 476 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390156 |
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| Product | predicted protein |
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| Protein accession | XP_001384060 |
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| Protein GI | 150865014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAAACGTCC AGCCAGTCAC CGTTTATGAT GATCAGATTG ATGACCTGGT TTACAAGAGA
GATCAGAAAT CCAAATGGAC GCGTGTTCGT AAGGCCGACA AGCATGAGGT TGATGACGTC
AAGCGGACGC GTAATGAAGA AGCATCGGAG AGACGTAGAA GGAACTACGA GGAGAAGTAG
GTATGTTTCA GACAGATAAT GGTAAAGAGA TAAGAGTTGA ATAATGAATA GTGGCAGGTA
AAATTAAAAC TTGAAGCTTC AAAAGAATTA ACATGAGAAT TCATTGTCTC TCAAAATCAA
GTAATATCAA TTATTGTATC AATTGTCACT TCAATTATCA AATCATTCTT GTCTCAATGC
TATCTCTCTC GCACTATTAT ATCAGACACC AATGAACAGT ACTAACATTT AATAGCTCGG
AGTTCACTCC TCTCGTAGAC TCAGACGGCA AGCCTTTGCC AAAGTCTGAA AGAAAACCGA
AAAGAAAAGT TGCTGTCATG ATTGGTTACT GTGGAACTGG CTACAATGGA ATGCAGTTGC
AGAACGATCC CAAGATTCCC ACCATTGAAA GAGACTTATA CGAAGCCTTT GCAGCCGCTG
GTGCTGTTTC CCCAGAGAAT GCCATGGACA TCAAGAAGTC TGGTTTCATG AGAGCTGCCA
GAACCGATAA GGGAGTTCAT GCTGCTGGAA ATGTCATTTC ATTAAAGTTG ATTATTGAAG
ATCCAGAAAT TTTGGCCAAG ATCAACGAGA AGTTGCCTGA CCAGATCAGA ATATGGGGCA
TTCAGCGTGT TACCAAGTCT TTTGATTGTC GCAAAATGTG TTCTTCCAGA GTGTACGAAT
ACTTGTTGCC TACATATTCA TTACTTCCAC CTAAACCTAA GACTGTGTTG AGTGATTTGG
TTGTCAAGAA ACGTCTGGAA GAACCAGGTG TTCTTAGAGA TGATGAAGAG GGTGATGTTT
GGTGGAAAGA AACAAGAAAA GCAATCTTGG AAGAAGGTCC TTTCACTGAA GAAGAACTTG
ATGATGTTCA GAACCAGATT CAAGATGAGA CTGTTTCCAC CAAGACTTAC GATGAAAACG
GATCAATCAC CGAGTTCGGA AAAATAATCA GAGCCATCAA AAACATTGAA AACAAAAGAA
GAAGAGCATA CACAGTCAGC ACTGAACGTC TTGAACTCTT CCGCCAAGCT ATGAAGCAAT
ATGAAGGCAC TCACAACTTC CACAACTTTA CTATTGGAAA GGCTTTCAAG GATCCTTCTT
CTAAAAGATT CATGAAGGAA ACCACTGTAT CTGATCCTTT CATCATTGAA GGTACAGAAT
GGGTTTCTAT TAAGATTCAT GGACAATCTT TCATGCTTCA TCAGATAAGA AAGATGATAG
CCATGGCAGT TCTTGTGATC CGTACTGGTT GTCCGATCTC TCGTATCCAC GACTGCTTCT
CATCCACCAA GATCAACATT CCTAAGGCAC CTGCATTAGG TTTGCTCTTG GAAAATCCAG
TCTATGAAGC TTACAACCAG ACTTTGCAAA AGAATGATTA TGAGCCTATC GACTTCGACA
AGTACGAAGC GGAAATGGAC AAATTTAAGA TGAAGTATAT CTACGACAAG ATCTATGCGG
AGGAAAATAA AGAAAATGTA TTTTATGGCT TCTTTGGCTT TATTGATACT TTC
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| Protein sequence | KNVQPVTVYD DQIDDSVYKR DQKSKWTRVR KADKHEVDDV KRTRNEEASE RLLTFNSSEF
TPLVDSDGKP LPKSERKPKR KVAVMIGYCG TGYNGMQLQN DPKIPTIERD LYEAFAAAGA
VSPENAMDIK KSGFMRAART DKGVHAAGNV ISLKLIIEDP EILAKINEKL PDQIRIWGIQ
RVTKSFDCRK MCSSRVYEYL LPTYSLLPPK PKTVLSDLVV KKRSEEPGVL RDDEEGDVWW
KETRKAILEE GPFTEEELDD VQNQIQDETV STKTYDENGS ITEFGKIIRA IKNIENKRRR
AYTVSTERLE LFRQAMKQYE GTHNFHNFTI GKAFKDPSSK RFMKETTVSD PFIIEGTEWV
SIKIHGQSFM LHQIRKMIAM AVLVIRTGCP ISRIHDCFSS TKINIPKAPA LGLLLENPVY
EAYNQTLQKN DYEPIDFDKY EAEMDKFKMK YIYDKIYAEE NKENVFYGFF GFIDTF
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