| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58869 |
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| Symbol | SPS21 |
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| ID | 4838384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1561358 |
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| End bp | 1562128 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640389699 |
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| Product | short-chain dehydrogenase, 2,4- dienoyl-CoA reductase |
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| Protein accession | XP_001384604 |
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| Protein GI | 126136160 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.947206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCCTT ACTTAAGACA AACTAGCATC GCCGGCAAGG TTGCCCTCAT TACTGGTGGT
ACCAAGAACT TGGGTGGTGA AACCGCCAGA GAATTGGCCT CCCTCGGTGC CAACGTTTTT
TTGCACTACA ACTCTAACCC AGAAGGAGCC AAGGCTTTTC AAACTGAATT GAAGACCTCC
TACCCTAAGG TTCAGGTTGA GATCTACCAA GGCAGTTTGG CTAAGGCAGA AGACTTGACC
AAGTTATTCG AAGCTGCCAA GAATGCTTTC CCACAGGGTG TTGACATCGC CATCAACAAC
GTTGGTAAGG CCGTCAAGAA GCCACTTGTC ACAGTCTCAG AAGAAGAATT CGACGAATTG
GACAGCATCA ACCATAAGGT TGCCTTCTTC TTCTTGAAGG AAGCTGCCAA GAACGTGAAT
GACAACGGTA GAATCGTGTC CATCGTCTCA TCCTTGTTGG CTGCCTACAT TCCAAACTAC
TCTGCCTACC AAGGTACAAA GGCCGGTGTT GAATTCTACT CCAGAGCTTT GTCCAAGGAA
TTGCAGTCCA GAGGTATCAC CGTCAACAGT GTTGCACCAG GTCCAATGGA CACTCCATTC
TTGCACAAGA TCGAACCAAA GGAAGTCGTT GGTCACTTGA AATCCGTTGC CCTCGGTGGA
AGATTGACCG AAGTCCCAGA CATTGTGCCA ATCGTCAGAT TCTTGGTTGG CGAAGGTGCC
TGGATCACTG GACAAACCAT CTTCGCTTCC GGTGGTTTCA CCACCCGTTA A
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| Protein sequence | MSPYLRQTSI AGKVALITGG TKNLGGETAR ELASLGANVF LHYNSNPEGA KAFQTELKTS
YPKVQVEIYQ GSLAKAEDLT KLFEAAKNAF PQGVDIAINN VGKAVKKPLV TVSEEEFDEL
DSINHKVAFF FLKEAAKNVN DNGRIVSIVS SLLAAYIPNY SAYQGTKAGV EFYSRALSKE
LQSRGITVNS VAPGPMDTPF LHKIEPKEVV GHLKSVALGG RLTEVPDIVP IVRFLVGEGA
WITGQTIFAS GGFTTR
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