| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58800 |
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| Symbol | NDI1 |
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| ID | 4838677 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 817656 |
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| End bp | 818948 |
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| Gene Length | 1293 bp |
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| Protein Length | 423 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389992 |
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| Product | NADH dehydrogenase, internal, ubiquinone |
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| Protein accession | XP_001384457 |
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| Protein GI | 126135866 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.127075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCA CAGCCAATTA CCAAAGTTCC GTGCCCTCGT TCAAAACCTC CATTCTCGTA
GTGGGTGGTG CCTATGCCGG CTTGGCAGCG GTGAAAAGCT TCCAGATCCA TTTAGCAGAA
CGGGCAAAAA ACTCAGAGTA CACTTCCTGG TTCCAAAGTC TATCGCAAAA GATCTCCATA
ACTTTGGTTG AGCCTCGGGC CGGTTTGTTG AATGTGCTCG GGATGCCTCG AGCCATAGTG
GATCCCAATT TCGCCAAGTC CCAGTACATT CAATTCCAAG AGTTGAACGA TTTACAATTT
GACGAAGTGA TATCCAGGGA CCAGAAGATA TTGCAGACAT TGAACGATTC CAAAGAAAGT
AACAGTGTCA CACATGTAGG CTTCGAGTTG AAATATGTCC ATGGCACTGT GACGTATTTG
GATGACCACA AGGCACAATA TATGCTCAAC AACGATCCTG ATAGCGAAAA GGGACTCATT
GACTTTGACT ACGTAGTATT AGCTACTGGC AGAGACAGAA GCTGGCCCAC AACACCAGAA
GGCTACACTT TTGATCATTT TATGGAAGAA ATGCAAAGAG CGCATGATAA CATTGAAAAG
CATGAAATTA TTTCTGTCAT AGGTGCTGGA GCTGTAGGCA TAGAAATTGC TGGGGACATC
AAAAATCACT TCCCAGACAA GACAGTCAAC TTAATACATC CCCATGCGTC TTTTCCTCCA
GAACCTTTAA GCAGCGAATT TCAAGATGCC ATCAGAGACT CCTTAAAGAG AGCCAATATT
AATATAATTA CCAACACCAG AATAGCCGAA GAAAAATCCA ACGGCGATTT AATTACGACT
ACAAACGAAA CTATTAAATC CGAGCTCAAT TTATGGTGCA CATCGCATAA GAATAACACC
TCTATACTCT CTAGCGAGAT TAGAGAATTA TTTGTGACCG AGAAAAACGA TATACATGTC
AATCAATTTC TTCAGATGGC CAAAGGTGAA AGATTGCACC CCAATTTTTT CGTTCTTGGA
GACTTGGTCA ATTTGCCCAT CATCAAGTCA GCAGGATGGG CAATGTACAT GGGTAGGCAA
GCTGCCAACA ATATCACCAG CATGATTTTT GACCACAAAT TAATAGAGCC ATTTCCCGAT
TTAACCAAGA TGCCTCGTGG AATGGTGATA ATTGCTGGAA ACGAAGAGAT TGTCAGTGAA
TTGAGTGGGG AAGTGACACT CAATCACGAG AACTATGTTG TAGAGTACAA GGATTATTGC
ATAGGGAAAG TACGGGCTAC ACTCGGACTA TAA
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| Protein sequence | MSVTANYQSS VPSFKTSILV VGGAYAGLAA VKSFQIHLAE RAKNSEYTSW FQSLSQKISI
TLVEPRAGLL NVLGMPRAIV DPNFAKSQYI QFQELNDLQF DEVISRDQKI LQTLNDSKES
FELKYVHGTV TYLDDHKAQY MLNNDPDSEK GLIDFDYVVL ATGRDRSWPT TPEGYTFDHF
MEEMQRAHDN IEKHEIISVI GAGAVGIEIA GDIKNHFPDK TVNLIHPHAS FPPEPLSSEF
QDAIRDSLKR ANINIITNTR IAEEKSNGDL ITTTNETIKS ELNLWCTSHK NNTSILSSEI
RELFVTEKND IHVNQFLQMA KGERLHPNFF VLGDLVNLPI IKSAGWAMYM GRQAANNITS
MIFDHKLIEP FPDLTKMPRG MVIIAGNEEI VSELSGEVTL NHENYVVEYK DYCIGKVRAT
LGL
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