Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_58666 |
Symbol | MFS42 |
ID | 4838416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 880203 |
End bp | 881399 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389731 |
Product | MFS transporter |
Protein accession | XP_001384121 |
Protein GI | 150865064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.210164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACCATCACTA TGTCAGACTT GATCCCCTTG AGAGACCGAG GCTTCTACCA GGGCTTGGCG AATGTATTCT TTGGATTAGG CTCTGCTTCC GGAGGTATCA TCGGTGGATT GGTAGCTGAC CATTTGGGCT GGAAATATGT TTTCATCTTA CAAGTGCCTT TGGCTGTGAT AGTAGGTCTT GCGCTCTACT GGAACCTCAA CTTACCCCCT GGCTCTCCCG GTTTGGGAGC ACACGGTGAG GATATCAAAC AGAAGTTAAA GAGAGTCGAC TTCTTGGGCT CATTCTTTTT GGTCAGCTCC CTTATGTGTG TGTTGATAGC GGCTTCCTTA GGAGGTAAAG AGATTTCCTA TTCGTCCAAG TCGTTTATCG GTTTGTGCAC AGCTTCGGCT CTCTTGTTGG GTGGCTTTAT ATATACCGAA GCTTATATTT CTGCTGAGCC TATCATCCCT ATTGAGTTGT TAGGAAACAG AACTGTGTTA TCATCTTCTT TGGCAAACTG GTTCTACACA ATGGGAGTGT TTTCCTACCT CTTCTACGTT CCAGTCTACT ATACTTCGGT TATGGACTTG ACAGCTACGC AAAACGGGCT GAGATTGATC CCAAATTTCT TTGGTGTATC CCTTGGTTCT ATTGGAGCTG GTATCTACAT GAAGAGAACT GGACGTTACT ACAAGTTGAC TGTTCTCGTT GGTATAATAT CGATCTACGG TGTTCTCAAG ATTTTCTTCA TCAATCCAAA CATCTCCTTA TTTGAACAGT TTACATTGTT GTTGCCTTCT GGCTTGGGAT ACTCGTGTGT TTTGACAGTG ACACTTTTGT CGTTGATTGC AGCTGTGCCT TCGAAGTACC AGGCATGTAC TACTTCCATC CAGTACACTT TCAGATCGAC TGGTTCGACT TTGGGAGTAG CTGTTGCCTC TGCTTTGTTC CAGAATGTCT TGAGATCCAA CTTAACATCT AAGATCCATG CGTTGATCCC AGATGTCAAC GAGGCAAACG AGATCATCAC CAAGGCTTTG GCCAACACAA ACTACACACA TGAAGCCCCC GAAATTGTCA GAGCAGCCAT CAGAGAATCG TATGCCTTGG GCTGTAAGGG TGCCTTTGCC GTAAGTGTGG TAACTGTATC TGTCGGATAC TTTTCTTCGT TGTTCATGAG AGAACACAAG CTCCATACCA GTGTGAATAG AGATTAA
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Protein sequence | TITMSDLIPL RDRGFYQGLA NVFFGLGSAS GGIIGGLVAD HLGWKYVFIL QVPLAVIVGL ALYWNLNLPP GSPGLGAHGE DIKQKLKRVD FLGSFFLVSS LMCVLIAASL GGKEISYSSK SFIGLCTASA LLLGGFIYTE AYISAEPIIP IELLGNRTVL SSSLANWFYT MGVFSYLFYV PVYYTSVMDL TATQNGSRLI PNFFGVSLGS IGAGIYMKRT GRYYKLTVLV GIISIYGVLK IFFINPNISL FEQFTLLLPS GLGYSCVLTV TLLSLIAAVP SKYQACTTSI QYTFRSTGST LGVAVASALF QNVLRSNLTS KIHALIPDVN EANEIITKAL ANTNYTHEAP EIVRAAIRES YALGCKGAFA VSVVTVSVGY FSSLFMREHK LHTSVNRD
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