| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58642 |
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| Symbol | |
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| ID | 4838498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1025189 |
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| End bp | 1026814 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640389813 |
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| Product | predicted protein |
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| Protein accession | XP_001384154 |
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| Protein GI | 150865083 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00988886 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.20524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAT GCAAACAGTT GTTGGATAGT GGAGCCGATG TCTTTTCTAA ATTTCTGTCG
TTAGGTAGAT TGATTCTGCT TCAGGGAAAG ATGGTTACTG ACTTAATTGA TTACTCGAAC
GGGAACCAAA GTCAACTTTC CAAGACAACT TTAAGACCCA TTAGAGAAGT AGATGGTTTC
TTAATGGAAT TATCCACGGC ATTCAAAAAA AGAAATAAGC CCAAACTGGT CACGGATATG
ATAAAATCGC CGAGCAAGTT CATTTCAACG GGCTTGCATA CTCTTGATAG TGATTTGGGT
GGTGGAATTC CAACTGGTGA GATTACTGAG ATATTTGGAT CTAGCGGATG TGGCAAATCG
CATATGCTTG CTCAACTTGC CATGGAATGT CAATTAAATG AAGGAGACTG CAAAGAATGT
ATTCACATTG GTACCGAATC ATTTCTCGAA ACGAAGAGAC TCCATCAAAT CCAACAATCA
TACGAGCTGA AGGGTTCAAC CGTGAGCTTG GACAATATTT CATATATATA TTGTCAAGAT
TTGGAGAGTC AGGATCATAT TATTTACACA CAATTGCCAA TTCATTTAGA ACTGAAGGCT
GGGAAAGTTC GCTTGCTAGT TATAGATAGC ATTGCACAGC ATTTGCGACG AGAAGGGTCT
CTTTCAAATT CGATGTATTT GGAAGAGCGA ATCAAGCAAC AGGAGAAGGA TCTAAAAGAT
TGTGAAGACT ATCAGTCAAT AAGACTGAAA CAAGAAAATA ATTTAAAGAG ATTTCAAAAA
TCTACAAAAT ACAGAAATCG AATGACAAAG CAACACTATT TGTATTTGCT TCACCGACAC
TTACAAAAAT TGGCTAAGAA GTACAATATT GCCGTAGTAG TGGTCAATCA AGTTAGCGAC
CACGCGTCTA CTTACCCATT AGGTGGAATT TTCGAAGATG AAATTAATAA TCCATTGAAT
TTAAACTTTC AATTGGGAAT TCATTCAGGA TGGGATGTTA AAACATTATA TTCACTTCAG
AAACAGAGAA AAGTTTTCGT AAACGAAAGG GAAGCAGACA TAATGGAAGC AGAGCTTGTG
AAGTCTATCA ATGAACTGCC AGTCAAGAAA AGAATAGTAG AAAATGAGCT GAACCTTGAC
ATGAAGCATC AGCGCAGAGA AAATAATGAT ATCAAGTACA ATAAACAAAA GGAGCTCTTG
TTTAAGTTGC ACAAATTAAG AAATTTAGAA ACAAAAAAGG TCATTCCAAC TTTGGGTTAC
CAATGGAGTT GCAGAATGTC TATCAGAATC ATGTTGATGA AAACCTACAG ACCCCTAATG
AAGAGCAGGG AACAATTAGA GATCGAAAAT AGCGAAGTTG TACATCCTGA TTCGGATCTT
ACATATGAAA AACTTTGTGA AGGCTTCTCA CTAGTTGATT CACAGATCAA TACTGATTCG
CAAATTGAAA GTAGAAAGCG AAATTATTCA AGCTTGAATG GCCAACGTAC CATAGAAACT
AGCATCAGTG GGTGGGAAGT CGAAAGATAT GCCAAAGTAG TATACTCGTC TTATTCTCCA
ATAATTTCTG GTAATTCCAA AATTCACTTT GTGATTGATA AGAATGGCTT ACATGAGAAT
ATCTAA
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| Protein sequence | MDECKQLLDS GADVFSKFSS LGRLISLQGK MVTDLIDYSN GNQSQLSKTT LRPIREVDGF
LMELSTAFKK RNKPKSVTDM IKSPSKFIST GLHTLDSDLG GGIPTGEITE IFGSSGCGKS
HMLAQLAMEC QLNEGDCKEC IHIGTESFLE TKRLHQIQQS YESKGSTVSL DNISYIYCQD
LESQDHIIYT QLPIHLESKA GKVRLLVIDS IAQHLRREGS LSNSMYLEER IKQQEKDLKD
CEDYQSIRSK QENNLKRFQK STKYRNRMTK QHYLYLLHRH LQKLAKKYNI AVVVVNQVSD
HASTYPLGGI FEDEINNPLN LNFQLGIHSG WDVKTLYSLQ KQRKVFVNER EADIMEAELV
KSINESPVKK RIVENESNLD MKHQRRENND IKYNKQKELL FKLHKLRNLE TKKVIPTLGY
QWSCRMSIRI MLMKTYRPLM KSREQLEIEN SEVVHPDSDL TYEKLCEGFS LVDSQINTDS
QIESRKRNYS SLNGQRTIET SISGWEVERY AKVVYSSYSP IISGNSKIHF VIDKNGLHEN
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