Gene PICST_58626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_58626 
SymbolEMC37 
ID4838980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp855241 
End bp857010 
Gene Length1770 bp 
Protein Length589 aa 
Translation table12 
GC content45% 
IMG OID640390295 
Productgamma-glutamyltransferase 
Protein accessionXP_001384117 
Protein GI150865061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTC CTGAAGCCTT CATCAAGTTT TCTTCGAGAA GATCCACTGT GTATTCCACC 
AAGGGAATCG TTTCTTCTAC CCAGTCCTTA GCCAACGCTG CTGGTCTCAG GATTCTTCTG
AAGGGTGGTA ATTGTGTGGA CGCAGCTATC GCCGTTCTGG CTGCTCTCTG TATTACCGAA
CCTACGTCAA CTGGTATTGG GGGTGACTGT TTTGCTCTCT ACTATAAGTT GGATGATAAG
AACGATCCCA AAAGCGGTAA GGTTCTTGGT TTGAATGGTA CCGGTAGAGC TGCTAAGGCT
GTGACTCCGC AAGATGTTTG GAATGAACAT AACCATGGTA AACCCATGAA GAGAATTCCG
TACACCTCTG TATTTGCTGT GACTGTTCCT GGAGCTATTG CTGGTTGGAA TGATGCCTAT
GACAAATGGG GCTCGGGAAA CGTTACCTTT GCTGAGATTC TCGAGCCTGC TATTGAGTTA
GCTGAAAAGG GTTTCCCCGT CGCTGAGCTT GCCAGCCGTT CTTGGAGATC TGCTTCAGTC
AAGTTGAAGA ATCAGAATCC AGATGTAGAC GTAGCCGACA ATGCATTTTT GTTTGACGGA
GAACCACCTC AAGAAGGAGA CTTTGTCACT AATAAACGTG TAGCTGAGAC GTTGAAAATA
GTGGCTAAGG AAGGTAAGAA GGGATTCTAC CACGGTCCAG TTGCTGAAGC TATCATCCGC
ACTACTGGTG CCAGAAATGG CAAACTTACT TTGGATGATC TTTCGTCTCA TACCTCAACC
TTTGTAGATC CAATCAAGCT CAATTTCCAG GGCTCTAATG TATGGGAAAT TCCTCCTAAT
GGCCATGGAT TGGTGGCCCT TTTGGCGCTT GGAATCATTC AGGAGCTTCA CAACTCGGGG
AAAATCGATA TCTACAAGTT GAAGCATAAT TCCGCCGAAT ACTTGCATCT CTTGGTGGAA
GTTTGTAAGA TCGCCTTCTA TGATTCGGAT GAATACGTCA CGGATCCTCA ATTCAAGGAT
CTTCCCATAG AATCACTCTT GAGCCCTGAA TACTTGAAGA AAAGAGCCAA ACTCTTTGAC
CCTTCCAAGA TCATCGATGG TGAAACGATG TCTCACGGAG TTCCTGATCC AAAGTACAAA
TCTGATACTG TCTACCTCAC AGTTACGGAC TCCAATGGAG AAGCCTGTTC CTTTATCAAC
TCTGTCTACC AGGGTTTTGG TTCTGGTATT CTTGTGGAGG ACTATGGTTT CTGTCTCCAC
AACCGTGGGG CAAACTTCAA CTTGAGTCCT GGAAAGAGCA ACTGTCTTGA AGGTGGTAAG
CGTCCATACC ATACAATTAT CCCTGGAATG ATCACCAATG AAGACAACTC GTTGTATGCG
TCATTTGGAA ATATGGGAGG CTTTGCCCAA CCCGTTTGTC ATGTCCAGCA TGTTCTCAAT
CTCACTGTGT TCAACTTCTC TCCACAGCAG CTGATTGACT CGCCACGTTT CATTCTTGAT
TCAGATGAAA ACAATGACGC AGACCGTGGT CGTGGTGCTG ATGGCCCTGT TAGAACTCCA
GTCACAGTGG TAGCTCTTGA GGAAGGTATT GACCAGAAAG TAGTCGATCA ATTGCAAGAA
CTCGGACATG AAACCAAAGT TTACACTGGT TATTCAAGAG GTACCTTTGG TAGAGCACAA
ATCATCAAGA AGGATGTCAA AAAGGGTAAT ATTGTCTATT CAGCAGGTTC TGACTTGAGA
GGTGATGGAG CAGCAGTGGC CTACTTGTGA
 
Protein sequence
MSIPEAFIKF SSRRSTVYST KGIVSSTQSL ANAAGLRILS KGGNCVDAAI AVSAALCITE 
PTSTGIGGDC FALYYKLDDK NDPKSGKVLG LNGTGRAAKA VTPQDVWNEH NHGKPMKRIP
YTSVFAVTVP GAIAGWNDAY DKWGSGNVTF AEILEPAIEL AEKGFPVAEL ASRSWRSASV
KLKNQNPDVD VADNAFLFDG EPPQEGDFVT NKRVAETLKI VAKEGKKGFY HGPVAEAIIR
TTGARNGKLT LDDLSSHTST FVDPIKLNFQ GSNVWEIPPN GHGLVALLAL GIIQELHNSG
KIDIYKLKHN SAEYLHLLVE VCKIAFYDSD EYVTDPQFKD LPIESLLSPE YLKKRAKLFD
PSKIIDGETM SHGVPDPKYK SDTVYLTVTD SNGEACSFIN SVYQGFGSGI LVEDYGFCLH
NRGANFNLSP GKSNCLEGGK RPYHTIIPGM ITNEDNSLYA SFGNMGGFAQ PVCHVQHVLN
LTVFNFSPQQ SIDSPRFILD SDENNDADRG RGADGPVRTP VTVVALEEGI DQKVVDQLQE
LGHETKVYTG YSRGTFGRAQ IIKKDVKKGN IVYSAGSDLR GDGAAVAYL