Gene PICST_58555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_58555 
Symbol 
ID4838926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp502552 
End bp503355 
Gene Length804 bp 
Protein Length267 aa 
Translation table12 
GC content43% 
IMG OID640390241 
Productpredicted protein 
Protein accessionXP_001384390 
Protein GI150865249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCG CGCAATCTAA TCTTTCAAAA ACCTCCAATA CTAGGACAAC TAGTGATTTC 
TCCAATATAA GGTTACTAAA TCTCAGTGAT GTTCACAAGG CTGCCAAAAC TTTGTTAGCC
TCGTTCAAGA CCGACGCTCT TGCCCGTTTA CTCGTGGCCC ACATCGAGAC TCAGGCCGAA
AAGGATAGAT GTGAAACCCT TCTCTATGAA GCTTATCTCA GACAACATAT TCTCAAGGGT
TTATGTTTTG GTATAAATGA AACCGACCGT GGTTTTGAAA CTGTTGCTAT CTGGTCAACT
CCAACATCTG TCCATGACGG TTTGGACAGT TTTGGAGTTT TGATGGAATC TGGCTACAAC
AAGGTCTGGG ACCTGTTTGG TGAAATAGGC CGCGAAAAGG TGTTCTATGG AATGTTACCC
TTGTTGCATG ATTCTTGTGA AAGAATCCTT ACGAACGATT CTCGTTTCAG AAATAAAGGT
GTATGGACCT TGGTGTATTT GGGTTCCACC GTAGAAGCCA GAGGCAAAGG TAATGTCAGA
AAGATGTTTG ACTACATGTA CACCAAGTAC ATTGATGCTT CGGACAACAA TATAGCATAT
TTGGAGAGTT CATCTCCTTC TAATATCCCT ATTTACGAAA GATTTGGATT CAGATTCTAC
GAGGATATCG TGTTGGGCGA TAGCACTTCA AAGGATGCCA TAGAAGGTGA GGATTTCGCT
GTTATGAACG TTATGATCAG AGGTCCCAAA GGCAGGGACT GGACCAAGGA CAAGAACGTT
ATCGCAGAAA AGGGAAAGTT GTAA
 
Protein sequence
MSGAQSNLSK TSNTRTTSDF SNIRLLNLSD VHKAAKTLLA SFKTDALARL LVAHIETQAE 
KDRCETLLYE AYLRQHILKG LCFGINETDR GFETVAIWST PTSVHDGLDS FGVLMESGYN
KVWDSFGEIG REKVFYGMLP LLHDSCERIL TNDSRFRNKG VWTLVYLGST VEARGKGNVR
KMFDYMYTKY IDASDNNIAY LESSSPSNIP IYERFGFRFY EDIVLGDSTS KDAIEGEDFA
VMNVMIRGPK GRDWTKDKNV IAEKGKL