| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58499 |
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| Symbol | SSY1.5 |
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| ID | 4838907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1667204 |
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| End bp | 1668955 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390222 |
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| Product | transcriptional regulator of multiple amino acid permeases |
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| Protein accession | XP_001384272 |
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| Protein GI | 150865167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATGGTAAAA CATTACAGAG AAAACTCAAG GTAAGACACC TTCAGATGAT TTCCTTTGGG
GGAACTCTAG GCGTGGGTCT ATTCTTGAAT TCTGGCAAAG CGTTCACAAT CGCTGGCGGT
TTGGGCACTT TACTTGCATT TGCTATTTGT GGTACTATTG TGTTGGCAAC GATCGTTTCC
TTCTGTGAAA TGGTCACTTT TGTATCTGTA GTCGATGGGG TCTCAGGCTT GAGTTCCCGG
TTCGTAGACG ACGCTTTTGG GTTCTGCGTT GGCTGGCTTT ATTTCTTCAG TTTTGCATTT
GGTTTGGCAG GCGAAGTCGT TGCAAGCGTC ATCATGTTGG CATACTACCC TTCTCTAAAT
ATTCCCGAAA GTAAAGGTAA TTCGGCTGGG TTCGTTACCT TGTTTCTCGG ATTGGTTGTG
CTATGCAATT TGGTGGATAT CAGAGTTTTT GGTGAAATCG AGTATATCTC CAGTTTGATC
AAATTAGTCT GGGTTTTGGC CATGATTGTC ATTATGATCG TAATGAATCG TGGAGGTTTC
GACAACGGCG TTATTGGCTT TAAGTTTTGG CAGCATGATC GATCCGATTT TGCTAATAAC
CTTATATTCG GTTTGTTCAG ACCTACATTT AATTTGCACG ATAATGGTAG CAGCTCTGAA
AGCGCCGGTA TTGGAAGTGA CAAGGGTCGT TTCTTATCTC TTGTAGTTGC CTTGATGATT
GTTTCATATG CCTATAGTGG AACGGAAATC GTTTGTATAG CTGCGTGTGA AGCACAGAAC
CCCAGAAAGG CTCTTCCTTC TGCTACAAAG AGAGTGTTCT GGAGAATTCT TATCTTCTAC
TGTTTGTCAG CCTTTGCGGT TTCGTTGAAC ATTTATGCTG GAGACCCCAG ATTGTTGAGA
TACTATCTGG GCAGTACAGG AGTATCTGCA AATGAGTTCA GTACCAACTA TGCTATTAAA
TATGTTGGTG GAGTAAATTG TATCAGCGAT TCTGTAGTTT ATGCTGGTGT TGGAAGCGGC
GCTCAGAGTC CATGGATTGT AGCATTGCAA TCTGCTGCTT TGTGCAGATT TAGTAATGTT
GTCAATGGCT TTTTGGTATT TTTTGCTGTC AGCTGTGGCA ATGCTCAGTT GTATGTCAGT
TCTAGAACAG TTTATTCTTT AGCATTACAG AAGAAAGCTC CCAAACAATT GACTTACTGC
AATCGGTTTG GAATTCCGTA TGTGGCTGTT TTATTTGCTG CTAGTTTCGG ATTACTTTCA
TACATCTGTG TCTCAGAGAG GGCTACTGTA GTTTTCATGA ATCTCACCAG TATTATTGCC
TCGTCTGGTA TATTTGTGTG GTTTGCCATG AGTTTGTCGT TTATAAGATT CTATTACGGC
TTGCGCAGAC GTCCAGATAT CATCAGCAGA GACGACAAGA ACTATCCTTA TAGATCGCCC
TTTCAGCCAT ACAGTGCTTT TGTTGGGCTC ATTGGATCTG CGTTCATTAT TCTCGGTATG
GGATTCGTTG TGTTCTTACA AGATGAATGG GATACTATGT TCTTCTTTTC CAGCTACGGT
ACACTTATAG TATTTGCCGT GCTTTATGTG GGCTATAGAT TGGTGAGAGG TACCAGAATT
CCTACGTTGG ATACGTTGGA CTTTGACTCT GGTAGAACAG AGCTTGATAG AGTGATCTGG
GACAGAGGGC GTGAGTACGA CGCTGGAAAC TTCAAGGACC TCACGCAAAA GTGGATGTCG
TTTTTGGCAT AA
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| Protein sequence | HGKTLQRKLK VRHLQMISFG GTLGVGLFLN SGKAFTIAGG LGTLLAFAIC GTIVLATIVS
FCEMVTFVSV VDGVSGLSSR FVDDAFGFCV GWLYFFSFAF GLAGEVVASV IMLAYYPSLN
IPESKGNSAG FVTLFLGLVV LCNLVDIRVF GEIEYISSLI KLVWVLAMIV IMIVMNRGGF
DNGVIGFKFW QHDRSDFANN LIFGLFRPTF NLHDNGSSSE SAGIGSDKGR FLSLVVALMI
VSYAYSGTEI VCIAACEAQN PRKALPSATK RVFWRILIFY CLSAFAVSLN IYAGDPRLLR
YYSGSTGVSA NEFSTNYAIK YVGGVNCISD SVVYAGVGSG AQSPWIVALQ SAALCRFSNV
VNGFLVFFAV SCGNAQLYVS SRTVYSLALQ KKAPKQLTYC NRFGIPYVAV LFAASFGLLS
YICVSERATV VFMNLTSIIA SSGIFVWFAM SLSFIRFYYG LRRRPDIISR DDKNYPYRSP
FQPYSAFVGL IGSAFIILGM GFVVFLQDEW DTMFFFSSYG TLIVFAVLYV GYRLVRGTRI
PTLDTLDFDS GRTELDRVIW DRGREYDAGN FKDLTQKWMS FLA
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