Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_58499 |
Symbol | SSY1.5 |
ID | 4838907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1667204 |
End bp | 1668955 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390222 |
Product | transcriptional regulator of multiple amino acid permeases |
Protein accession | XP_001384272 |
Protein GI | 150865167 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0833] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CATGGTAAAA CATTACAGAG AAAACTCAAG GTAAGACACC TTCAGATGAT TTCCTTTGGG GGAACTCTAG GCGTGGGTCT ATTCTTGAAT TCTGGCAAAG CGTTCACAAT CGCTGGCGGT TTGGGCACTT TACTTGCATT TGCTATTTGT GGTACTATTG TGTTGGCAAC GATCGTTTCC TTCTGTGAAA TGGTCACTTT TGTATCTGTA GTCGATGGGG TCTCAGGCTT GAGTTCCCGG TTCGTAGACG ACGCTTTTGG GTTCTGCGTT GGCTGGCTTT ATTTCTTCAG TTTTGCATTT GGTTTGGCAG GCGAAGTCGT TGCAAGCGTC ATCATGTTGG CATACTACCC TTCTCTAAAT ATTCCCGAAA GTAAAGGTAA TTCGGCTGGG TTCGTTACCT TGTTTCTCGG ATTGGTTGTG CTATGCAATT TGGTGGATAT CAGAGTTTTT GGTGAAATCG AGTATATCTC CAGTTTGATC AAATTAGTCT GGGTTTTGGC CATGATTGTC ATTATGATCG TAATGAATCG TGGAGGTTTC GACAACGGCG TTATTGGCTT TAAGTTTTGG CAGCATGATC GATCCGATTT TGCTAATAAC CTTATATTCG GTTTGTTCAG ACCTACATTT AATTTGCACG ATAATGGTAG CAGCTCTGAA AGCGCCGGTA TTGGAAGTGA CAAGGGTCGT TTCTTATCTC TTGTAGTTGC CTTGATGATT GTTTCATATG CCTATAGTGG AACGGAAATC GTTTGTATAG CTGCGTGTGA AGCACAGAAC CCCAGAAAGG CTCTTCCTTC TGCTACAAAG AGAGTGTTCT GGAGAATTCT TATCTTCTAC TGTTTGTCAG CCTTTGCGGT TTCGTTGAAC ATTTATGCTG GAGACCCCAG ATTGTTGAGA TACTATCTGG GCAGTACAGG AGTATCTGCA AATGAGTTCA GTACCAACTA TGCTATTAAA TATGTTGGTG GAGTAAATTG TATCAGCGAT TCTGTAGTTT ATGCTGGTGT TGGAAGCGGC GCTCAGAGTC CATGGATTGT AGCATTGCAA TCTGCTGCTT TGTGCAGATT TAGTAATGTT GTCAATGGCT TTTTGGTATT TTTTGCTGTC AGCTGTGGCA ATGCTCAGTT GTATGTCAGT TCTAGAACAG TTTATTCTTT AGCATTACAG AAGAAAGCTC CCAAACAATT GACTTACTGC AATCGGTTTG GAATTCCGTA TGTGGCTGTT TTATTTGCTG CTAGTTTCGG ATTACTTTCA TACATCTGTG TCTCAGAGAG GGCTACTGTA GTTTTCATGA ATCTCACCAG TATTATTGCC TCGTCTGGTA TATTTGTGTG GTTTGCCATG AGTTTGTCGT TTATAAGATT CTATTACGGC TTGCGCAGAC GTCCAGATAT CATCAGCAGA GACGACAAGA ACTATCCTTA TAGATCGCCC TTTCAGCCAT ACAGTGCTTT TGTTGGGCTC ATTGGATCTG CGTTCATTAT TCTCGGTATG GGATTCGTTG TGTTCTTACA AGATGAATGG GATACTATGT TCTTCTTTTC CAGCTACGGT ACACTTATAG TATTTGCCGT GCTTTATGTG GGCTATAGAT TGGTGAGAGG TACCAGAATT CCTACGTTGG ATACGTTGGA CTTTGACTCT GGTAGAACAG AGCTTGATAG AGTGATCTGG GACAGAGGGC GTGAGTACGA CGCTGGAAAC TTCAAGGACC TCACGCAAAA GTGGATGTCG TTTTTGGCAT AA
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Protein sequence | HGKTLQRKLK VRHLQMISFG GTLGVGLFLN SGKAFTIAGG LGTLLAFAIC GTIVLATIVS FCEMVTFVSV VDGVSGLSSR FVDDAFGFCV GWLYFFSFAF GLAGEVVASV IMLAYYPSLN IPESKGNSAG FVTLFLGLVV LCNLVDIRVF GEIEYISSLI KLVWVLAMIV IMIVMNRGGF DNGVIGFKFW QHDRSDFANN LIFGLFRPTF NLHDNGSSSE SAGIGSDKGR FLSLVVALMI VSYAYSGTEI VCIAACEAQN PRKALPSATK RVFWRILIFY CLSAFAVSLN IYAGDPRLLR YYSGSTGVSA NEFSTNYAIK YVGGVNCISD SVVYAGVGSG AQSPWIVALQ SAALCRFSNV VNGFLVFFAV SCGNAQLYVS SRTVYSLALQ KKAPKQLTYC NRFGIPYVAV LFAASFGLLS YICVSERATV VFMNLTSIIA SSGIFVWFAM SLSFIRFYYG LRRRPDIISR DDKNYPYRSP FQPYSAFVGL IGSAFIILGM GFVVFLQDEW DTMFFFSSYG TLIVFAVLYV GYRLVRGTRI PTLDTLDFDS GRTELDRVIW DRGREYDAGN FKDLTQKWMS FLA
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