| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58217 |
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| Symbol | MDR12 |
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| ID | 4839026 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 916386 |
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| End bp | 918032 |
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| Gene Length | 1647 bp |
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| Protein Length | 540 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390341 |
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| Product | multidrug resistance protein 2 |
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| Protein accession | XP_001384480 |
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| Protein GI | 126135912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0156255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT TCGTCAAGGA TTCATTTTGG GGAACGTTTG TCAACCGTAT ATCGGGTCGC
AGATTGTTCC AACACAAGGA AGACCGTTCT GACTACGTGA TTCCAGAAAA ATATCTTCCT
GGTTACAAGG AGGTTGAGGA AGAGTCTTCG TTGAAGGAAG CAAAGGCTGA AGGTGAAGTT
GACGCGGACG ACAACGCGTC GTCTTCTACC GTTACCAAGA CTGGTGACGA CAAGGTAATT
GTTACATGGG ACAGCGATGA TGACCCAGAA AACCCATACA ACTGGCCATT GTACCAGAAG
ATCCTTCTTT TGGCCGAAGT AGCATTCTTG ACTGTGTCCG TGTATATGGG TGCAGCCATC
TACACTCCTG GTGTCGAAGA CATTATGATA AAATTCAACA TTAACAGAAC ATTGGCCACC
TTGCCTTTGA CTATGTTCGT GGTTGGTTAC GGTCTTGGTC CAATGTTCTT GTCGCCTATG
ACTGAAAACG CTGCCATTGG TAGAACTCCA GTATACATTG TAACTTTGTT CATCTTTTTC
GTGTTGCAAA TCCCAACTGC CTTATCTGAA AGCATTGCAG GTTTGGCTGT TTTGAGATTG
ATCTCTGGTT TCTTTGCCTC TCCTGCTTTG GCTACTGGAG GTGCTACCAT TGGTGACGTT
ATCTCGATGC CTTACATGCC AGTCGGTATC GCTGCCTGGG CTATTGGAGG TGTCTGTGGT
CCATCCTTGG GTCCATTGAT CGGTTCCGTT TTGGTCGTCA AGGGTTCTTG GAGATGGCCC
TTCTGGTTCA TGGCAATTAT CTCAGGTACT TGTTTCCTCG TTTTGAGTTG GACTTTGCCA
GAAACCTACG GTAAGGCTTT GCTCTACAAG AAGGCTAAGA GATTGAGAAG AGTCACCGGT
AACCAAAACA TCACCAGTGA AGGTCACATT GAAAACTCGA AGTTGACAGC TAAAGAATTG
GCTGTAGACT TATTGTGGAG ACCTTTCGAA ATTACCATCA TCGAACCAGT TGTCTTGTTG
ATTAATGTCT ACATTGCTTT AGTCTACACT GTCATGTACC TTTGGTTTGA GGCCTTCCCA
ATTGTGTTTG TTGAAACCAA GCACTTCACT CTTATCGAAA TGGGTGTTTC TTACGTCAGT
GTCATGGTTG GTATTTTCAT TGGTGCTGCT ATCTACATTC CTATTATTTA CAGAGCTTTT
ACTAAGAAGG TTCTTGCTGG TGAAATGGTC ACTCCTGAAG TTTTCTTGCC AAGTGCCATT
TTCGGAAGTA TCATGATGCC AATCGGTATC TTTGTTTTCG GTTGGTCTGC CTCCCCAGAT
TTACACTGGA TTGGCCCTAT CATTGGTGCT GCCCTTTTTG CTACAGGTGC CTTCATCATT
TTCCAGACTT TGTTCAACTA CTTGGGAGCA TCTTTCTACA GATACTTAGC CTCTGTCTTC
GCCAGTAATG CCTTATTCAG ATCTGTCATT GCCGGTTGTT TCCCATTGTT TGGTGACGCC
TTGTTCAAGA ACGTTGGATC TGAAAAGTAC CCTGTTGGAT GGGGTTCTTC AATTTTGGGA
TTCATTGCCT TGGCTATGAT TGCCATTCCT GTCTTCTTCG CATTGAACGG TCCTAAGTTG
CGTGCTAGAT CTAGATACGC CAATTAA
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| Protein sequence | MANFVKDSFW GTFVNRISGR RLFQHKEDRS DYVIPEKYLP GYKEEAKAEG EVDADDNASS
STVTKTGDDK VIVTWDSDDD PENPYNWPLY QKILLLAEVA FLTVSVYMGA AIYTPGVEDI
MIKFNINRTL ATLPLTMFVV GYGLGPMFLS PMTENAAIGR TPVYIVTLFI FFVLQIPTAL
SESIAGLAVL RLISGFFASP ALATGGATIG DVISMPYMPV GIAAWAIGGV CGPSLGPLIG
SVLVVKGSWR WPFWFMAIIS GTCFLVLSWT LPETYGKALL YKKAKRLRRV TGNQNITSEG
HIENSKLTAK ELAVDLLWRP FEITIIEPVV LLINVYIALV YTVMYLWFEA FPIVFVETKH
FTLIEMGVSY VSVMVGIFIG AAIYIPIIYR AFTKKVLAGE MVTPEVFLPS AIFGSIMMPI
GIFVFGWSAS PDLHWIGPII GAALFATGAF IIFQTLFNYL GASFYRYLAS VFASNALFRS
VIAGCFPLFG DALFKNVGSE KYPVGWGSSI LGFIALAMIA IPVFFALNGP KLRARSRYAN
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