| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58118 |
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| Symbol | |
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| ID | 4839047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 873269 |
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| End bp | 875905 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640390362 |
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| Product | predicted protein |
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| Protein accession | XP_001384119 |
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| Protein GI | 150865063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5594] Uncharacterized integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.840307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.938716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTC TCTCAACTGA AGAAGACTAT GACTATTCTG ACCTAACAAA CTCATATATG
GGAATTTTTA ATACAAAAGC GTTTGAAAGG TTTCTCAGTA CCACCCAAAC AGGATATGCC
CATACAAGCT CTGGAATCGA CTTAAACCTA CTACTAAAGA CTCTAATCAC TTCATTATGT
ATATGTACTA TTCAATTGAC CGTTTTTTGT TTTTTTCGAT CTACGTTGAA GATAGTCTAC
CAACCAAGAT GCTTCTGTGT TCCTGTTAAC GAAAGAATGG ATCCACTCCC TAGAGGTTTT
CTTTCCTGGG TGTTACCGAC AATGAAGTCT AACATGCACT TTTACCTATC TATGGGTTTG
GATACTTATT TCTTCGTCAG ATTCATCAAC GTTTTACTAT TATACTTTAT CTTTATTGGA
ACTCTGAATA TGATAATATT ACTACCTATC AACTGGACAG GAAGTGACCA ATTTTATCAA
GCTCCAGGCT TAGATCGACT TAGTCTTTCA AACATTGCCA GTTCCAAGGT GAGTAGATTG
AATTCTCACT TCTTAATGGG TTTGGTTACG ATAGGCACTC TCCACTGCTT AATAATCTAC
GAACTTCTGA GCTTTGTTTC TATAAGACAG TCCTACTTAT TGTCTCCAAA CCACAGAGAA
TCTGCACAAG GAAAAATGCT TTTGATATCT AATTGCCCAC ATCAACTTCT AGAGGAGGAA
GTATTGAGTA GTGTTTTTGG ATTCATTCCT GGTGGAATTA AGAAAGTTTG GTTTGTTCAT
GATTTCAAAG ATATTTCTAG AGAAGTTCAA AAGGCTAGAA GTGCTCTAGA TACATTAGAA
AAGGCTCAAA TTTTGTATTT GAAAAAGTCC TATCGGTGCC AATTTCCGAG AAAGAAATGG
TTGCGAAATT ATTTTTCTGA CAAGATTGAA GACATAACCG ACCACCTAAG CGAAGATGAA
TACCATCATT CGTTGGAACC ACAATTTTAT CCAGCAATCT CCATGACCAT CTTTTTCCCA
ATAATAAATA GATCAGTTGA GTTAAAACTA CCTGGTTTTC TCAGATTCTT CGCATTTCAA
GACAAAATTT CAATGACCAC TTGGTCCGCG AAACAACTCG ACATCAGCCT TAAAGCGATT
GATGCGCAGA AGCAACTAAT GAACGAGGGA AGGCTAACAA AGCATACCAA ATTATTCGTT
CAGTTTAACA CACAAGAGGG GGCATATATA GCTCACCAAT GTTTACTTTC AAGGAACCAG
GGAGATCTTG ATCTGAGTTT AGTAGAAGTT CATGCTGGTG ATATAAAGTG GAACAATTTA
TCCAGGAACA ACTCCTACAC ATCTTTAGTT GAAAAGTACA TTGTCAATCT TGCTTTCATT
TGTATTATAA TACTTTACGT TGTTCCAGTC TCATTTATTG GGCTCTTTTC GCAGATCCCC
TTCTTGGTTC AGTTGATGCC ATTTCTAGCC TGGATATACA AATTTCCCGA AGAAGTGAGA
GAAACAATCT CTAGTTTCTT ACCTTCAATT CTATTAACAA TACTTACTGA AATAGTCATG
GTAACCTTTA GATACTTGAC AAAGTTTAAG GGAATCCTAT CAGGGGCCGA ACTTGAATTA
GATCTACAGA GGTGGCACTT CTCTTTCCTC TTTGTCCAGC AGTTTCTTGT TGTGACAATT
CTGTCCAGTA TAACTGTCAT TTTCAAGCAA ATATTGGACC AGCCAACTTC GATTCCCATA
TTATTGGCGA CAAACCTTCC TAAGGGTGCA AACTTTTTCT TCCAGTTTTT TGCATTGAAA
GCCTTTGCTT TCTGTGGAGC CAATTTCATG AGAGCAGAAC TGCTTATATT TCATTATTTG
ACTTCCAAGC TTCGGGATAT AACTCCAAGA CAAAAGTTTC ATTCACTAAC CGGATTGCCT
AAGATTAAAT GGGGTACTGT GTATCCCGTC TTCTCTGTCT ATGCTTGTAT TGGAATTACA
TACTCCATCA TATCTCCCTT GATCTCAATT TTTATAATAT TCATATTAAT GTTGATATTG
TTGTACTACA AGTATGCTTT GAAGTACATT TATAGTCATA TCAACGAATC AGAAACACAA
GGGAGATTGT ACCCCATTGC ATTATTGCAT TTATATACGG GGATGTATTG TCTTGAGTGT
TGTCTTATTG GAATCTTCTT TCTACTGAAA GACGAAGATG GAAATTCACC AATGAAAGTT
CATGGATGGA TAATGATATT GGTATTATTG ATTACAATTT TCGGCCATCA AACGATTTTT
AATCGGTTTG TTAAACATTT CTCTTATTTG CCAATTCTTT CTGACTTCAA GAATAAAGAG
ATTAATACCA CTGAAAAGAA CAACAGCAAC TGCGTGGTTG GCGAAGTTGC AAACTTTAAA
TCAACAGATG GCGATGATCA CGAACTTCTT TATCTTCATC CGGCATTTAA ATTTGAAGAC
CCAAAATTAT GGCTACCTTC TGATCCACTA GGTATCTGCT TAAATCTCAT TCAGCATATT
GAACATCTTG TTCCCGGTCT TCAAGGTGGT ACGACCAAAG GAGCATCCGT AATATTCGAC
AACACGTATC GCAAAGTCAA AATAAGAGTA ACGGAAGCAC CCCCAGATTA TAAATAG
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| Protein sequence | MSTLSTEEDY DYSDLTNSYM GIFNTKAFER FLSTTQTGYA HTSSGIDLNL LLKTLITSLC
ICTIQLTVFC FFRSTLKIVY QPRCFCVPVN ERMDPLPRGF LSWVLPTMKS NMHFYLSMGL
DTYFFVRFIN VLLLYFIFIG TSNMIILLPI NWTGSDQFYQ APGLDRLSLS NIASSKVSRL
NSHFLMGLVT IGTLHCLIIY ELSSFVSIRQ SYLLSPNHRE SAQGKMLLIS NCPHQLLEEE
VLSSVFGFIP GGIKKVWFVH DFKDISREVQ KARSALDTLE KAQILYLKKS YRCQFPRKKW
LRNYFSDKIE DITDHLSEDE YHHSLEPQFY PAISMTIFFP IINRSVELKL PGFLRFFAFQ
DKISMTTWSA KQLDISLKAI DAQKQLMNEG RLTKHTKLFV QFNTQEGAYI AHQCLLSRNQ
GDLDSSLVEV HAGDIKWNNL SRNNSYTSLV EKYIVNLAFI CIIILYVVPV SFIGLFSQIP
FLVQLMPFLA WIYKFPEEVR ETISSFLPSI LLTILTEIVM VTFRYLTKFK GILSGAELEL
DLQRWHFSFL FVQQFLVVTI SSSITVIFKQ ILDQPTSIPI LLATNLPKGA NFFFQFFALK
AFAFCGANFM RAESLIFHYL TSKLRDITPR QKFHSLTGLP KIKWGTVYPV FSVYACIGIT
YSIISPLISI FIIFILMLIL LYYKYALKYI YSHINESETQ GRLYPIALLH LYTGMYCLEC
CLIGIFFLSK DEDGNSPMKV HGWIMILVLL ITIFGHQTIF NRFVKHFSYL PILSDFKNKE
INTTEKNNSN CVVGEVANFK STDGDDHELL YLHPAFKFED PKLWLPSDPL GICLNLIQHI
EHLVPGLQGG TTKGASVIFD NTYRKVKIRV TEAPPDYK
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